RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 POLR2MP0CAP2 368 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 TOP1P11387 765 aaKnown RBP1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 ETS1P14921 441 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 AREGP15514 252 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 GLRA2P23416 452 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 PTPN6P29350 595 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 AXLP30530 894 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SFNP31947 248 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SERPINB6P35237 376 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 MAGEA4P43358 317 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 PPOXP50336 477 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 ARHGDIBP52566 201 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 GEMP55040 296 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 DIO3P55073 304 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC35A2P78381 396 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SPIBQ01892 262 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 PDZK1IP1Q13113 114 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SNX1Q13596 522 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SERTAD2Q14140 314 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 NCF4Q15080 339 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 CARTPTQ16568 116 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SGCBQ16585 318 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 IMMTQ16891 758 aaKnown RBP1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 PAGE2BQ5JRK9 111 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 TCHHL1Q5QJ38 904 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 TAF3Q5VWG9 929 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 WDR74Q6RFH5 385 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 ASRGL1Q7L266 308 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 LUZP2Q86TE4 346 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 CTAGE6Q86UF2 777 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 VPS36Q86VN1 386 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 CDH26Q8IXH8 852 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 MNS1Q8NEH6 495 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 TRPV3Q8NET8 790 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR52K1Q8NGK4 314 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR13C2Q8NGS9 318 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SPPL2BQ8TCT7 592 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 TFB1MQ8WVM0 346 aaKnown RBP1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 THRSPQ92748 146 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 AGPAT1Q99943 283 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 CCSER1Q9C0I3 900 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 REEP1Q9H902 201 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 FANCEQ9HB96 536 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 MIEF1Q9NQG6 463 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 GLRX2Q9NS18 164 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 HOMER3Q9NSC5 361 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SOHLH2Q9NX45 425 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 GDAP2Q9NXN4 497 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 DPM3Q9P2X0 92 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 FAM153AQ9UHL3 310 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 PTBP2Q9UKA9 531 aaKnown RBP1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 MRTO4Q9UKD2 239 aaKnown RBP1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR1A2Q9Y585 309 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 ANKRD12Q6UB98 2062 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 NPIPA5A0A0B4J1W7 369 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 GOLGA6L7A0A1B0GV03 622 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 A0A1W2PQ67 120 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 CFAP73A6NFT4 308 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 NME2P1O60361 137 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 TSPAN2O60636 221 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 SCRG1O75711 98 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 AKR7A3O95154 331 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 WISP3O95389 354 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 NUDT14O95848 222 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 MT-ATP6P00846 226 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 FCER2P06734 321 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 TPM3P06753 285 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 GSTA1P08263 222 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 HIST1H2AGP0C0S8 130 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 FUT3P21217 361 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 CMA1P23946 247 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 ATP5OP48047 213 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 ENPEPQ07075 957 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 TRDNQ13061 729 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 NME3Q13232 169 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 DDX39BQ13838 428 aaKnown RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 RAB35Q15286 201 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 KRT31Q15323 416 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 KYAT1Q16773 422 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 C1orf185Q5T7R7 199 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 RTL6Q6ICC9 239 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 RHBDD2Q6NTF9 364 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 Q6ZRG5 221 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 BNIPLQ7Z465 357 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 RANBP3LQ86VV4 465 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 AMZ2Q86W34 360 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZCCHC7Q8N3Z6 543 aaKnown RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF433Q8N7K0 673 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 NECAB1Q8N987 351 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 DRAXINQ8NBI3 349 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 LINC00301Q8NCQ3 95 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR4F17Q8NGA8 305 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR52E1Q8NGJ3 308 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 NANPQ8TBE9 248 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 FBXO25Q8TCJ0 367 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 DQX1Q8TE96 717 aaKnown RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 C2orf15Q8WU43 125 aaKnown RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 UBTD2Q8WUN7 234 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms