RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 AIPL1Q9NZN9 384 aa2.27□□□□□ -2.05
HMGB3P12-201ENST00000438745 CD274Q9NZQ7 290 aa2.27□□□□□ -2.05
HMGB3P12-201ENST00000438745 WARS2Q9UGM6 360 aaKnown RBP2.27□□□□□ -2.05
HMGB3P12-201ENST00000438745 SUN2Q9UH99 717 aa2.27□□□□□ -2.05
HMGB3P12-201ENST00000438745 PRO0461Q9UI25 63 aa2.27□□□□□ -2.05
HMGB3P12-201ENST00000438745 BLOC1S6Q9UL45 172 aa2.27□□□□□ -2.05
HMGB3P12-201ENST00000438745 IFT52Q9Y366 437 aa2.27□□□□□ -2.05
HMGB3P12-201ENST00000438745 TACC2O95359 2948 aa2.27□□□□□ -2.05
HMGB3P12-201ENST00000438745 OBSL1O75147 1896 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 DIDO1Q9BTC0 2240 aaKnown RBP2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 IGLV3-22A0A075B6J6 115 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 IGHV1OR15-1A0A075B7D0 117 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 IGHV2-70DA0A0C4DH43 119 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 TMEM110-MUSTN1A8MSY1 372 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 IDSB3KWA1 339 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 NDC80O14777 642 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 EMC8O43402 210 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 PRKYO43930 277 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 KLHL41O60662 606 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 HCN1O60741 890 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 SLITRK3O94933 977 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 SEMG1P04279 462 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 CTSEP14091 401 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 KCNE1P15382 129 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 FUT3P21217 361 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 ATP6V1B2P21281 511 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 LEPP41159 167 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 CA7P43166 264 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 NAMPTP43490 491 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 PRKXP51817 358 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 CBX1P83916 185 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 EGFEM1PQ0D2K5 195 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 ALX1Q15699 326 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 TATDN3Q17R31 274 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 CFAP221Q4G0U5 840 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 GALNT17Q6IS24 598 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 CCDC137Q6PK04 289 aaKnown RBP2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 Q6ZSR6 202 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 Q6ZVH6 145 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 ARCQ7LC44 396 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 FAM220AQ7Z4H9 259 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 TMEM110Q86TL2 294 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 PPP1R27Q86WC6 154 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 CLDN19Q8N6F1 224 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 SLC5A11Q8WWX8 675 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 SH3YL1Q96HL8 342 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 CNDP1Q96KN2 507 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 PGLYRP4Q96LB8 373 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 SENP8Q96LD8 212 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 AMDHD1Q96NU7 426 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 TSGA13Q96PP4 275 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 TXN2Q99757 166 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 GAL3ST1Q99999 423 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 SPZ1Q9BXG8 430 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 RHBGQ9H310 441 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR51J1Q9H342 316 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 FN3KRPQ9HA64 309 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 RDH14Q9HBH5 336 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 C6orf50Q9HD87 102 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 B3GNT2Q9NY97 397 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 SIGLEC8Q9NYZ4 499 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 RYR3Q15413 4870 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 MYH6P13533 1939 aa2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 ZNF469Q96JG9 3925 aaPredicted RBP2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 TDRD6O60522 2096 aaKnown RBP2.26□□□□□ -2.05
HMGB3P12-201ENST00000438745 WNK1Q9H4A3 2382 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 DCHS2Q6V1P9 2916 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 PLXNA2O75051 1894 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 IGHV7-81A0A0B4J1V7 117 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 A0A0J9YXY3 114 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 LOC100653049A0A140TA62 436 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 A0A1B0GUS0 222 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 A0A1B0GWB2 263 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 METTL21EPA6NDL7 271 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 K7EQM0 130 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 POLR1CO15160 346 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 RS1O15537 224 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 GMFGO60234 142 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 TPST2O60704 377 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 TBX19O60806 448 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 UGT2B17O75795 530 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 MMP23AO75900 390 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 KRT34O76011 436 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 ADCY5O95622 1261 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 IL1BP01584 269 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 PRB2P02812 416 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 RNH1P13489 461 aaKnown RBP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 HNF1AP20823 631 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 GLRA2P23416 452 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 FGF9P31371 208 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 YWHABP31946 246 aaKnown RBP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 CD80P33681 288 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 BIDP55957 195 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 ORC2Q13416 577 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 FZD2Q14332 565 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 ELOCQ15369 112 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 FAM71F2Q6NXP2 309 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 MOB3BQ86TA1 216 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 TRIM69Q86WT6 500 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms