RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 MBNL2Q5VZF2 373 aaKnown RBP12.44□□□□□ -0.42
HDAC8-213ENST00000436675 OLFML2AQ68BL7 652 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 FIP1L1Q6UN15 594 aaKnown RBP12.44□□□□□ -0.42
HDAC8-213ENST00000436675 BRD3OSQ6XYD6 125 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 RHOUQ7L0Q8 258 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 HIST3H2AQ7L7L0 130 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 LRRC28Q86X40 367 aaPredicted RBP12.44□□□□□ -0.42
HDAC8-213ENST00000436675 GOLGA6L1Q8N7Z2 621 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 SMYD1Q8NB12 490 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 NOXO1Q8NFA2 376 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 OR4F5Q8NH21 305 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 NSMAFQ92636 917 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 HIST1H2ACQ93077 130 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 UBE2FQ969M7 185 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 SLC25A37Q9NYZ2 338 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 SLAMF8Q9P0V8 285 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 KLHL21Q9UJP4 597 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 PRORSD1PA6NEY8 169 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 A8MXK9 166 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 F5H0A9 414 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-213ENST00000436675 RGS16O15492 202 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-213ENST00000436675 ZNF205O95201 554 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 CD55P08174 381 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 LIPAP38571 399 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 KRTAP10-3P60369 221 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 PSG4Q00888 419 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 SCARB2Q14108 478 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 HIST3H3Q16695 136 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 TMEM155Q4W5P6 130 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 MTX3Q5HYI7 312 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 SWT1Q5T5J6 900 aaKnown RBP12.43□□□□□ -0.42
HDAC8-213ENST00000436675 TTC33Q6PID6 262 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-213ENST00000436675 LINC00114Q6XXX2 140 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 NANOGNBQ7Z5D8 188 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 ARMC8Q8IUR7 673 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 MSRB3Q8IXL7 192 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 OR2Z1Q8NG97 314 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.43□□□□□ -0.426e-6■■■■■ 28.1
HDAC8-213ENST00000436675 OR52B2Q96RD2 323 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 ZNF607Q96SK3 696 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 CITED1Q99966 193 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 CENPHQ9H3R5 247 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 NANOGQ9H9S0 305 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 SIAEQ9HAT2 523 aa12.43□□□□□ -0.42
HDAC8-213ENST00000436675 SDR39U1Q9NRG7 319 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-213ENST00000436675 A0A1B0GUS0 222 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 A0A1W2PRG6 482 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 CEACAM18A8MTB9 384 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 UBDO15205 165 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 CHP2O43745 196 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 TRMUO75648 421 aaKnown RBP12.42□□□□□ -0.42
HDAC8-213ENST00000436675 LYPD3O95274 346 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 PLATP00750 562 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 THY1P04216 161 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 ACADSP16219 412 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 HOXB9P17482 250 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-213ENST00000436675 VSNL1P62760 191 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 RELBQ01201 579 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 FMODQ06828 376 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 PSG7Q13046 419 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 CDK5R2Q13319 367 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 TAF11Q15544 211 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 NPTX1Q15818 432 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 NRN1LQ496H8 165 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 ENTPD8Q5MY95 495 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 ZNF613Q6PF04 617 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 BTNL3Q6UXE8 466 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 UNQ6126/PRO20091Q6UXV3 157 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 C9orf139Q6ZV77 190 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 RBM45Q8IUH3 476 aaKnown RBP12.42□□□□□ -0.42
HDAC8-213ENST00000436675 ZNF283Q8N7M2 679 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 ANKRD42Q8N9B4 389 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 OR10S1Q8NGN2 331 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 VANGL1Q8TAA9 524 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-213ENST00000436675 ITLN1Q8WWA0 313 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 ASB10Q8WXI3 467 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 UPRTQ96BW1 309 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 RBM4BQ9BQ04 359 aaKnown RBP12.42□□□□□ -0.42
HDAC8-213ENST00000436675 SSBP3Q9BWW4 388 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-213ENST00000436675 MRPL13Q9BYD1 178 aaKnown RBP12.42□□□□□ -0.42
HDAC8-213ENST00000436675 SLC19A3Q9BZV2 496 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 POFUT1Q9H488 388 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 SLCO1B3Q9NPD5 702 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 C1RLQ9NZP8 487 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 SLC7A7Q9UM01 511 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 UGT2A1Q9Y4X1 527 aa12.42□□□□□ -0.42
HDAC8-213ENST00000436675 IGKV1D-43A0A0B4J1Z2 117 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 CLPSL1A2RUU4 121 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 SRRM5B3KS81 715 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 TIMM23O14925 209 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 SERPINB7O75635 380 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 OPN1SWP03999 348 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 THRBP10828 461 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 TNFSF4P23510 183 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 SLC6A2P23975 617 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 RPL18Q07020 188 aaKnown RBP12.41□□□□□ -0.42
HDAC8-213ENST00000436675 RUNDC3AQ59EK9 446 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 ZMAT1Q5H9K5 638 aa12.41□□□□□ -0.42
HDAC8-213ENST00000436675 ZNF362Q5T0B9 420 aaPredicted RBP12.41□□□□□ -0.42
HDAC8-213ENST00000436675 ASPHD2Q6ICH7 369 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms