RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 HCCSP53701 268 aa20.27■□□□□ 0.84
CPSF4-204ENST00000436336 BLMHQ13867 455 aa20.27■□□□□ 0.84
CPSF4-204ENST00000436336 FBXW9Q5XUX1 488 aa20.27■□□□□ 0.84
CPSF4-204ENST00000436336 DPY19L4Q7Z388 723 aa20.27■□□□□ 0.84
CPSF4-204ENST00000436336 LHFPL3Q86UP9 236 aa20.27■□□□□ 0.84
CPSF4-204ENST00000436336 UBE2J2Q8N2K1 259 aa20.27■□□□□ 0.84
CPSF4-204ENST00000436336 NANOGP1Q8N7R0 232 aa20.27■□□□□ 0.84
CPSF4-204ENST00000436336 MND1Q9BWT6 205 aa20.27■□□□□ 0.84
CPSF4-204ENST00000436336 MALT1Q9UDY8 824 aa20.27■□□□□ 0.84
CPSF4-204ENST00000436336 TMEM14AQ9Y6G1 99 aa20.27■□□□□ 0.84
CPSF4-204ENST00000436336 A0A1W2PQL4 384 aaPredicted RBP20.27■□□□□ 0.83
CPSF4-204ENST00000436336 TMEM129A0AVI4 362 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 ZNF670-ZNF695F2Z2N8 137 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 TNFSF13O75888 250 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 SCG5P05408 212 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 TFAP2AP05549 437 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 NR1H2P55055 460 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 MRPS34P82930 218 aaKnown RBP20.27■□□□□ 0.83
CPSF4-204ENST00000436336 ZNF85Q03923 595 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 GALEQ14376 348 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 PCK2Q16822 640 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 XAF1Q6GPH4 301 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 VWA1Q6PCB0 445 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 TFAP2EQ6VUC0 442 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.27■□□□□ 0.83
CPSF4-204ENST00000436336 OTOSQ8NHW6 89 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 KCNG2Q9UJ96 466 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 COPS3Q9UNS2 423 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 CACNA1BQ00975 2339 aa20.27■□□□□ 0.83
CPSF4-204ENST00000436336 TMCC2O75069 709 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 CNOT4O95628 575 aaKnown RBP20.26■□□□□ 0.83
CPSF4-204ENST00000436336 PTHP01270 115 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 SPARCP09486 303 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 NPR2P20594 1047 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 MSR1P21757 451 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 CASP6P55212 293 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 FAPQ12884 760 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 OTPQ5XKR4 325 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 NAXEQ8NCW5 288 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 FCGR1BQ92637 280 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 NABP1Q96AH0 204 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 MYCBPQ99417 103 aaPredicted RBP20.26■□□□□ 0.83
CPSF4-204ENST00000436336 FOXB1Q99853 325 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 ALG8Q9BVK2 526 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 PLSCR4Q9NRQ2 329 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 TMEM38BQ9NVV0 291 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 LAMP5Q9UJQ1 280 aa20.26■□□□□ 0.83
CPSF4-204ENST00000436336 ZNF99A8MXY4 864 aaPredicted RBP20.25■□□□□ 0.83
CPSF4-204ENST00000436336 PHYHO14832 338 aa20.25■□□□□ 0.83
CPSF4-204ENST00000436336 JUNBP17275 347 aaPredicted RBP20.25■□□□□ 0.83
CPSF4-204ENST00000436336 RPS27P42677 84 aaKnown RBP20.25■□□□□ 0.83
CPSF4-204ENST00000436336 LSM6P62312 80 aaKnown RBP20.25■□□□□ 0.83
CPSF4-204ENST00000436336 NEDD8Q15843 81 aa20.25■□□□□ 0.83
CPSF4-204ENST00000436336 SGCAQ16586 387 aa20.25■□□□□ 0.83
CPSF4-204ENST00000436336 KLHL36Q8N4N3 616 aa20.25■□□□□ 0.83
CPSF4-204ENST00000436336 ZNF454Q8N9F8 522 aa20.25■□□□□ 0.83
CPSF4-204ENST00000436336 CDADC1Q9BWV3 514 aa20.25■□□□□ 0.83
CPSF4-204ENST00000436336 EMC7Q9NPA0 242 aa20.25■□□□□ 0.83
CPSF4-204ENST00000436336 SH3BGRL2Q9UJC5 107 aa20.25■□□□□ 0.83
CPSF4-204ENST00000436336 NCOA6Q14686 2063 aaPredicted RBP20.25■□□□□ 0.83
CPSF4-204ENST00000436336 PSKH1P11801 424 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 ALOX5APP20292 161 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 RPL5P46777 297 aaKnown RBP20.24■□□□□ 0.83
CPSF4-204ENST00000436336 NRN1LQ496H8 165 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 UBE2UQ5VVX9 321 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 RFLNBQ8N5W9 214 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 RORBQ92753 470 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 STARD4Q96DR4 205 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 MRPL48Q96GC5 212 aaKnown RBP20.24■□□□□ 0.83
CPSF4-204ENST00000436336 SFXN3Q9BWM7 321 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 SIAEQ9HAT2 523 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 PROCRQ9UNN8 238 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 CAB39Q9Y376 341 aaPredicted RBP20.24■□□□□ 0.83
CPSF4-204ENST00000436336 E9PLN8 166 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 CTSSP25774 331 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 PMPCAQ10713 525 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 FAM27BQ5VT28 67 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 SLC18B1Q6NT16 456 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 SSX6Q7RTT6 188 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 BTLAQ7Z6A9 289 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 ATCAYQ86WG3 371 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 OR52N1Q8NH53 320 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 VKORC1Q9BQB6 163 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 CYB5R1Q9UHQ9 305 aa20.24■□□□□ 0.83
CPSF4-204ENST00000436336 LSM2Q9Y333 95 aaKnown RBP20.24■□□□□ 0.83
CPSF4-204ENST00000436336 LCKP06239 509 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 MPGP29372 298 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 CA7P43166 264 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 ALDH3B2P48448 385 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 WNT4P56705 351 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 ACTA2P62736 377 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 ACTG2P63267 376 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 MED22Q15528 200 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 OR2G6Q5TZ20 316 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 TMPRSS11AQ6ZMR5 421 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 ZNF627Q7L945 461 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 ZNF367Q7RTV3 350 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 THEM6Q8WUY1 208 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 HTRA1Q92743 480 aa20.23■□□□□ 0.83
CPSF4-204ENST00000436336 POLR1DQ9Y2S0 133 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms