RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 KIR3DX1Q9H7L2 352 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 LOC100289279A0A1B0GTE1 492 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 ZNF716A6NP11 495 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 COX7A2P2O60397 106 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 TPMTP51580 245 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 PITX1P78337 314 aaPredicted RBP10.29□□□□□ -0.76
SCN4A-201ENST00000435607 HOXC5Q00444 222 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 GPR19Q15760 415 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 SFXN4Q6P4A7 337 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 VASH2Q86V25 355 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 OR51A4Q8NGJ6 313 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 PIGTQ969N2 578 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 SDR39U1Q9NRG7 319 aaPredicted RBP10.29□□□□□ -0.76
SCN4A-201ENST00000435607 IGSF5Q9NSI5 407 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 SLCO1B1Q9Y6L6 691 aa10.29□□□□□ -0.76
SCN4A-201ENST00000435607 ADAM10O14672 748 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 PHLDA2Q53GA4 152 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 HENMT1Q5T8I9 393 aaKnown RBP10.28□□□□□ -0.76
SCN4A-201ENST00000435607 CPEB2Q7Z5Q1 589 aaKnown RBP10.28□□□□□ -0.76
SCN4A-201ENST00000435607 GALNT9Q9HCQ5 603 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 THYN1Q9P016 225 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 RNF150Q9ULK6 438 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 TMPRSS5Q9H3S3 457 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 MYH4Q9Y623 1939 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 TYROBPO43914 113 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 OR7C2O60412 319 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 ATXN1LP0C7T5 689 aaKnown RBP10.28□□□□□ -0.76
SCN4A-201ENST00000435607 ITGAMP11215 1152 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 PPP3CBP16298 524 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 RFX2P48378 723 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 SNRPGP62308 76 aaKnown RBP10.28□□□□□ -0.76
SCN4A-201ENST00000435607 BAMBIQ13145 260 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 VMA21Q3ZAQ7 101 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 LINC00346Q8IVM7 164 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 OR2L13Q8N349 312 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 ADIPOR1Q96A54 375 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 GORASP2Q9H8Y8 452 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 ATP6V1G2-DDX39BF2Z307 99 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 PIPP12273 146 aaPredicted RBP10.28□□□□□ -0.76
SCN4A-201ENST00000435607 NID1P14543 1247 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 HOXD9P28356 352 aaPredicted RBP10.28□□□□□ -0.76
SCN4A-201ENST00000435607 ALKBH1Q13686 389 aaKnown RBP10.28□□□□□ -0.76
SCN4A-201ENST00000435607 SIX1Q15475 284 aaPredicted RBP10.28□□□□□ -0.76
SCN4A-201ENST00000435607 TMEM106AQ96A25 262 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 TAAR9Q96RI9 348 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 CR2P20023 1033 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 DCXRQ7Z4W1 244 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 MARCH3Q86UD3 253 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 POM121L2Q96KW2 1035 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 HS3ST2Q9Y278 367 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 CLDN24A6NM45 220 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 TARM1B6A8C7 271 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 GABRPO00591 440 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 RPA2P15927 270 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 UQCRFS1P47985 274 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 ZNF140P52738 457 aaPredicted RBP10.28□□□□□ -0.76
SCN4A-201ENST00000435607 CLDN22Q8N7P3 220 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 GLIS1Q8NBF1 620 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 STACQ99469 402 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 EXOSC3Q9NQT5 275 aaKnown RBP10.28□□□□□ -0.76
SCN4A-201ENST00000435607 VAPAQ9P0L0 249 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 MYH7BA7E2Y1 1941 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 UPK1BO75841 260 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 C1SP09871 688 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 GPR85P60893 370 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 LRRTM3Q86VH5 581 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 MORN4Q8NDC4 146 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 OR6M1Q8NGM8 313 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 FBXO17Q96EF6 278 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 OCEL1Q9H607 264 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 PPP1R3CQ9UQK1 317 aa10.28□□□□□ -0.76
SCN4A-201ENST00000435607 MAP1BP46821 2468 aaKnown RBP10.27□□□□□ -0.76
SCN4A-201ENST00000435607 SCGB1C2P0DMR2 95 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 RAB1AP62820 205 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 REEP5Q00765 189 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 Q56UQ5 140 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 DGAT2L7PQ6IED9 249 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 STEAP1BQ6NZ63 245 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 OR13H1Q8NG92 308 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 OR51F2Q8NH61 342 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 RNF141Q8WVD5 230 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 EMC7Q9NPA0 242 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 THAP10Q9P2Z0 257 aaPredicted RBP10.27□□□□□ -0.76
SCN4A-201ENST00000435607 HRH3Q9Y5N1 445 aa10.27□□□□□ -0.76
SCN4A-201ENST00000435607 NAV1Q8NEY1 1877 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 IFT172Q9UG01 1749 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 MS4A18H0YCH9 400 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 XRCC3O43542 346 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 BMP2P12643 396 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 CEACAM3P40198 252 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 MS4A18Q3C1V0 323 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 SSX9Q7RTT3 188 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 MED9Q9NWA0 146 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 MMP17Q9ULZ9 603 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 NRG2O14511 850 aaPredicted RBP10.27□□□□□ -0.77
SCN4A-201ENST00000435607 PMP2P02689 132 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 RFC3P40938 356 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 HSF1Q00613 529 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 DUSP2Q05923 314 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 ADAM5Q6NVV9 412 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms