RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 FCN2Q15485 313 aa13.11□□□□□ -0.31
RFTN1-203ENST00000432519 NHLRC1Q6VVB1 395 aa13.11□□□□□ -0.31
RFTN1-203ENST00000432519 ZNF248Q8NDW4 579 aa13.11□□□□□ -0.31
RFTN1-203ENST00000432519 ST7LQ8TDW4 575 aa13.11□□□□□ -0.31
RFTN1-203ENST00000432519 ELP5Q8TE02 316 aa13.11□□□□□ -0.31
RFTN1-203ENST00000432519 SPACA9Q96E40 222 aaPredicted RBP13.11□□□□□ -0.31
RFTN1-203ENST00000432519 B3GALT1Q9Y5Z6 326 aa13.11□□□□□ -0.31
RFTN1-203ENST00000432519 CHCHD2Q9Y6H1 151 aaPredicted RBP13.11□□□□□ -0.31
RFTN1-203ENST00000432519 PMS2P1A4D2B8 440 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 ETV2O00321 342 aaPredicted RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 FCER2P06734 321 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 ANOS1P23352 680 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 SFTPDP35247 375 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 HOXD12P35452 270 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 EIF1AXP47813 144 aaKnown RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 ZNF41P51814 821 aaPredicted RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 PITPNAQ00169 270 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 RASGEF1BQ0VAM2 473 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 SNTB2Q13425 540 aaKnown RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 FAM205BPQ63HN1 556 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 TMEM53Q6P2H8 277 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 FAM198BQ6UWH4 519 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 OR2M3Q8NG83 312 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 OR51A2Q8NGJ7 313 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 OR52N5Q8NH56 324 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 GHITMQ9H3K2 345 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 NKIRAS2Q9NYR9 191 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 NTN3O00634 580 aaPredicted RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 GSTZ1O43708 216 aaPredicted RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 SRSF10O75494 262 aaKnown RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 KDM4BO94953 1096 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 NAGAP17050 411 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 CXCL3P19876 107 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 MAPK3P27361 379 aaPredicted RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 P2RY4P51582 365 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 ZP4Q12836 540 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 MRPL28Q13084 256 aaKnown RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 BCL2A1Q16548 175 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 FDX2Q6P4F2 183 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 ASB5Q8WWX0 329 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 MR1Q95460 341 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 DDIT4LQ96D03 193 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 HAVCR1Q96D42 359 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 TMEM246Q9BRR3 403 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 DPAGT1Q9H3H5 408 aa13.1□□□□□ -0.31
RFTN1-203ENST00000432519 RPH3AQ9Y2J0 694 aaPredicted RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 PTRH2Q9Y3E5 179 aaKnown RBP13.1□□□□□ -0.31
RFTN1-203ENST00000432519 PHYHO14832 338 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 CTDSPLO15194 276 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 ZNF208O43345 1280 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 CRABP1P29762 137 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 CLDN6P56747 220 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 CAMK2DQ13557 499 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 TMEM69Q5SWH9 247 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 LRFN4Q6PJG9 635 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 GPAT4Q86UL3 456 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 CATSPERDQ86XM0 798 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 OR11H7Q8NGC8 314 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 MIB2Q96AX9 1013 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 SCMH1Q96GD3 660 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 SLITRK2Q9H156 845 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 DCTDP32321 178 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 SUMO3P55854 103 aaPredicted RBP13.09□□□□□ -0.31
RFTN1-203ENST00000432519 DLX5P56178 289 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 ZXDAP98168 799 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 CDK10Q15131 360 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 C5orf46Q6UWT4 87 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 C1orf210Q8IVY1 113 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 TCTE3Q8IZS6 198 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 ASB17Q8WXJ9 295 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 AKAP1Q92667 903 aaKnown RBP eCLIP13.09□□□□□ -0.31
RFTN1-203ENST00000432519 OR5B2Q96R09 309 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 GAL3ST1Q99999 423 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 HRASLSQ9HDD0 168 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 HS3ST3B1Q9Y662 390 aa13.09□□□□□ -0.31
RFTN1-203ENST00000432519 IGHV1-45A0A0A0MS14 117 aa13.08□□□□□ -0.31
RFTN1-203ENST00000432519 CDAP32320 146 aa13.08□□□□□ -0.31
RFTN1-203ENST00000432519 CCR9P51686 369 aa13.08□□□□□ -0.31
RFTN1-203ENST00000432519 RIDAP52758 137 aaKnown RBP13.08□□□□□ -0.31
RFTN1-203ENST00000432519 TAS2R20P59543 309 aa13.08□□□□□ -0.31
RFTN1-203ENST00000432519 ZFP36L1Q07352 338 aaKnown RBP13.08□□□□□ -0.31
RFTN1-203ENST00000432519 PEAR1Q5VY43 1037 aaPredicted RBP13.08□□□□□ -0.31
RFTN1-203ENST00000432519 SLC39A7Q92504 469 aa13.08□□□□□ -0.31
RFTN1-203ENST00000432519 S100A16Q96FQ6 103 aaKnown RBP13.08□□□□□ -0.31
RFTN1-203ENST00000432519 G6PC2Q9NQR9 355 aa13.08□□□□□ -0.31
RFTN1-203ENST00000432519 CENPMQ9NSP4 180 aa13.08□□□□□ -0.31
RFTN1-203ENST00000432519 TAS2R4Q9NYW5 299 aa13.08□□□□□ -0.31
RFTN1-203ENST00000432519 MYEF2Q9P2K5 600 aaKnown RBP13.08□□□□□ -0.31
RFTN1-203ENST00000432519 LOC400499M0QZD8 3231 aa13.08□□□□□ -0.32
RFTN1-203ENST00000432519 NCOA6Q14686 2063 aaPredicted RBP13.08□□□□□ -0.32
RFTN1-203ENST00000432519 AKR7A2O43488 359 aa13.08□□□□□ -0.32
RFTN1-203ENST00000432519 RAF1P04049 648 aa13.08□□□□□ -0.32
RFTN1-203ENST00000432519 CALCBP10092 127 aa13.08□□□□□ -0.32
RFTN1-203ENST00000432519 COX6A1P12074 109 aa13.08□□□□□ -0.32
RFTN1-203ENST00000432519 ART1P52961 327 aa13.08□□□□□ -0.32
RFTN1-203ENST00000432519 SNRPD2P62316 118 aaKnown RBP13.08□□□□□ -0.32
RFTN1-203ENST00000432519 BTG1P62324 171 aa13.08□□□□□ -0.32
RFTN1-203ENST00000432519 IL11RAQ14626 422 aa13.08□□□□□ -0.32
RFTN1-203ENST00000432519 CARD17Q5XLA6 110 aa13.08□□□□□ -0.32
RFTN1-203ENST00000432519 KCTD18Q6PI47 426 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms