RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ZNF439Q8NDP4 499 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 DNERQ8NFT8 737 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 RDH11Q8TC12 318 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 SPPL2BQ8TCT7 592 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 TMEM239Q8WW34 195 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 MRGPRX2Q96LB1 330 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 INPP5KQ9BT40 448 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 MAP1LC3CQ9BXW4 147 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 NXF2Q9GZY0 626 aaKnown RBP4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ZBTB20Q9HC78 741 aaPredicted RBP4.87□□□□□ -1.63
PTPN4-203ENST00000430976 HSPB7Q9UBY9 170 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 MYH4Q9Y623 1939 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ARHGEF12Q9NZN5 1544 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF99A8MXY4 864 aaPredicted RBP4.87□□□□□ -1.63
PTPN4-203ENST00000430976 DEGS1O15121 323 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 OR7C1O76099 320 aaPredicted RBP4.87□□□□□ -1.63
PTPN4-203ENST00000430976 DIRAS1O95057 198 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CFDP00746 253 aaPredicted RBP4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ESR1P03372 595 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 JUNP05412 331 aaKnown RBP4.87□□□□□ -1.63
PTPN4-203ENST00000430976 AKAIN1P0CW23 69 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 GIFP27352 417 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 PYCR1P32322 319 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CXADRP78310 365 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ZP4Q12836 540 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 NTRK3Q16288 839 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 PLAC9Q5JTB6 97 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 DNLZQ5SXM8 178 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CHSY1Q86X52 802 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CILP2Q8IUL8 1156 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 LRRC52Q8N7C0 313 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 OR4D9Q8NGE8 314 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CMBLQ96DG6 245 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 C20orf27Q9GZN8 174 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 MAP1LC3AQ9H492 121 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 SEMA4BQ9NPR2 832 aaPredicted RBP4.87□□□□□ -1.63
PTPN4-203ENST00000430976 FBXL12Q9NXK8 326 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ARL15Q9NXU5 204 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 HACL1Q9UJ83 578 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 OAZ3Q9UMX2 235 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 PRXQ9BXM0 1461 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 MYH3P11055 1940 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 TRDCB7Z8K6 153 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 C9orf172C9J069 976 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 MPDU1O75352 247 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CST1P01037 141 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 GAPDHP04406 335 aaKnown RBP4.87□□□□□ -1.63
PTPN4-203ENST00000430976 FCER1AP12319 257 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 FASP25445 335 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 SSTR1P30872 391 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 SSTR4P31391 388 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 GDNFP39905 211 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 GPR1P46091 355 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 TAS2R30P59541 319 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 EMX2Q04743 252 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 TMEM267Q0VDI3 215 aaPredicted RBP4.87□□□□□ -1.63
PTPN4-203ENST00000430976 TUBB3Q13509 450 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 TMEM132DQ14C87 1099 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 IQCJQ1A5X6 159 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 GJB7Q6PEY0 223 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF474Q6S9Z5 364 aaPredicted RBP4.87□□□□□ -1.63
PTPN4-203ENST00000430976 UBE3DQ7Z6J8 389 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF664Q8N3J9 261 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 SLC44A3Q8N4M1 653 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF555Q8NEP9 628 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 OR10AD1Q8NGE0 317 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 OR51G2Q8NGK0 314 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 OR10G9Q8NGN4 311 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 OR5W2Q8NH69 310 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 Q8WTZ3 238 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF488Q96MN9 340 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 PPDPFQ9H3Y8 114 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 BABAM1Q9NWV8 329 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 BET1LQ9NYM9 111 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 GALPQ9UBC7 116 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ADGRL2O95490 1459 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ARID1AO14497 2285 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CARMIL2Q6F5E8 1435 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 KIAA1324LA8MWY0 1029 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-203ENST00000430976 C3orf80F5H4A9 247 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 M0R129 80 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 MSTNO14793 375 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 RBFOX2O43251 390 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF205O95201 554 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 SLC25A27O95847 323 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 BMP5P22003 454 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 POLR2HP52434 150 aaKnown RBP4.86□□□□□ -1.63
PTPN4-203ENST00000430976 TBPL1P62380 186 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 RPL7AP62424 266 aaKnown RBP4.86□□□□□ -1.63
PTPN4-203ENST00000430976 IL10RBQ08334 325 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 ACSM2AQ08AH3 577 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 FUT7Q11130 342 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 SLC36A2Q495M3 483 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 WDR25Q64LD2 544 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-203ENST00000430976 STEAP4Q687X5 459 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 ACSM2BQ68CK6 577 aa4.86□□□□□ -1.63
PTPN4-203ENST00000430976 HSD17B13Q7Z5P4 300 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-203ENST00000430976 TMEM173Q86WV6 379 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-203ENST00000430976 PHF13Q86YI8 300 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF595Q8IYB9 648 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms