RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RELTQ969Z4 430 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 MRPL13Q9BYD1 178 aaKnown RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 METTL7AQ9H8H3 244 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 SERINC1Q9NRX5 453 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 DDX28Q9NUL7 540 aaKnown RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 PISDQ9UG56 409 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 FBXL2Q9UKC9 423 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 NPIPA1Q9UND3 350 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 MRPS7Q9Y2R9 242 aaKnown RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 TECTAO75443 2155 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 A0A1W2PQ72 361 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 H0YC42 278 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 COX6A1P12074 109 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 IGFBP3P17936 291 aaPredicted RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 FSTP19883 344 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 DUSP3P51452 185 aaPredicted RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 RIDAP52758 137 aaKnown RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 POU3F1Q03052 451 aaPredicted RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 PLA2G7Q13093 441 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 RNASE12Q5GAN4 147 aaKnown RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 SLC22A10Q63ZE4 541 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 SLC23A3Q6PIS1 610 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 DNM1P34Q6PK57 102 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 AGBL5Q8NDL9 886 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 OR52I2Q8NH67 350 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 CAPSLQ8WWF8 208 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 PPP1R14AQ96A00 147 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 BEX2Q9BXY8 128 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 DEFB126Q9BYW3 111 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 G6PC2Q9NQR9 355 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 MCUBQ9NWR8 336 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 MED29Q9NX70 200 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 COPZ2Q9P299 210 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 KLHL9Q9P2J3 617 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 STEAP1Q9UHE8 339 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 R4GMQ9 66 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 A0A0A6YYJ9 748 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 FAM172BPA6NC97 362 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 H3BML4 177 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 KHDRBS3O75525 346 aaKnown RBP12.47□□□□□ -0.41
HOXC4-202ENST00000430889 YES1P07947 543 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 CELA2AP08217 269 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 CCL4P13236 92 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 CDK2P24941 298 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 GIFP27352 417 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 ART1P52961 327 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 MRPS10P82664 201 aaKnown RBP12.47□□□□□ -0.41
HOXC4-202ENST00000430889 SNTA1Q13424 505 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 CDK10Q15131 360 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 OR7E24Q6IFN5 339 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 C3orf33Q6P1S2 294 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 DEGS2Q6QHC5 323 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 BTN2A1Q7KYR7 527 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 KRT77Q7Z794 578 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 TMPRSS12Q86WS5 348 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 C1orf210Q8IVY1 113 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 ASB5Q8WWX0 329 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 AKAP1Q92667 903 aaKnown RBP eCLIP12.47□□□□□ -0.41
HOXC4-202ENST00000430889 NIPAL2Q9H841 368 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 SH2D2AQ9NP31 389 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 NUDT15Q9NV35 164 aa12.47□□□□□ -0.41
HOXC4-202ENST00000430889 RPH3AQ9Y2J0 694 aaPredicted RBP12.47□□□□□ -0.41
HOXC4-202ENST00000430889 KIAA1549Q9HCM3 1950 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 ANXA2P2A6NMY6 339 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 TRAF3IP2O43734 574 aaPredicted RBP12.46□□□□□ -0.41
HOXC4-202ENST00000430889 LDOC1O95751 146 aaPredicted RBP12.46□□□□□ -0.41
HOXC4-202ENST00000430889 C1QBP02746 253 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 MAS1P04201 325 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 ISG15P05161 165 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 ANXA2P07355 339 aaKnown RBP12.46□□□□□ -0.41
HOXC4-202ENST00000430889 ADH6P28332 368 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 GZMKP49863 264 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 FOXK1P85037 733 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 SIGLEC14Q08ET2 396 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 BCL2L15Q5TBC7 163 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 OLFML2AQ68BL7 652 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 LINGO2Q7L985 606 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.46□□□□□ -0.41
HOXC4-202ENST00000430889 BIVMQ86UB2 503 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 GLB1L2Q8IW92 636 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 RNF133Q8WVZ7 376 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 GCDHQ92947 438 aaPredicted RBP12.46□□□□□ -0.41
HOXC4-202ENST00000430889 S100A16Q96FQ6 103 aaKnown RBP12.46□□□□□ -0.41
HOXC4-202ENST00000430889 CACNG6Q9BXT2 260 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 FBXL3Q9UKT7 428 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 HS3ST3B1Q9Y662 390 aa12.46□□□□□ -0.41
HOXC4-202ENST00000430889 ANKRD20A5PA0PJZ0 165 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 SLC17A2O00624 439 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 KRT33AO76009 404 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 GLSO94925 669 aaPredicted RBP12.45□□□□□ -0.42
HOXC4-202ENST00000430889 MT-ND4P03905 459 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 GSTT2P0CG29 244 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 GSTT2BP0CG30 244 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 TMIGD3P0DMS9 266 aaPredicted RBP12.45□□□□□ -0.42
HOXC4-202ENST00000430889 RCVRNP35243 200 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 BIDP55957 195 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 RAB25P57735 213 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 TAS2R20P59543 309 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 EXT1Q16394 746 aa12.45□□□□□ -0.42
HOXC4-202ENST00000430889 ODF4Q2M2E3 257 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms