RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 GRHPRQ9UBQ7 328 aa14.7□□□□□ -0.06
UBE3D-204ENST00000430071 A0A096LNT2 108 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 FAM171A2A8MVW0 826 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 BHLHE40O14503 412 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 BAG2O95816 211 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 TXNDC12O95881 172 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 APEHP13798 732 aaKnown RBP14.69□□□□□ -0.06
UBE3D-204ENST00000430071 APOBEC3AP31941 199 aaPredicted RBP14.69□□□□□ -0.06
UBE3D-204ENST00000430071 CLRN1P58418 232 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 MYBPC1Q00872 1141 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 NAAAQ02083 359 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 SLC36A3Q495N2 470 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 FAM205BPQ63HN1 556 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 GPR139Q6DWJ6 353 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 RPL13AP3Q6NVV1 102 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 HDDC2Q7Z4H3 204 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 DEPDC4Q8N2C3 294 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 FBXO17Q96EF6 278 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 TSSK6Q9BXA6 273 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 ULBP2Q9BZM5 246 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 NOX3Q9HBY0 568 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 TBC1D23Q9NUY8 699 aa14.69□□□□□ -0.06
UBE3D-204ENST00000430071 TMEFF2Q9UIK5 374 aaPredicted RBP14.69□□□□□ -0.06
UBE3D-204ENST00000430071 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.69□□□□□ -0.066e-9■■■■□ 26.2
UBE3D-204ENST00000430071 A6NIZ1 184 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 CENPBD1B2RD01 187 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 H7C1C5 153 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 SOCS2O14508 198 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 IMPA2O14732 288 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 ARPC3O15145 178 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 GPRIN2O60269 458 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 MITFO75030 526 aaPredicted RBP14.68□□□□□ -0.06
UBE3D-204ENST00000430071 IGLV1-44P01699 117 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 OSMP13725 252 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 RPS6KA3P51812 740 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 UBE2NP61088 152 aaKnown RBP14.68□□□□□ -0.06
UBE3D-204ENST00000430071 RAP1BP61224 184 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 LCN6P62502 163 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 RAP1AP62834 184 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 PPP2R2BQ00005 443 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 HGFACQ04756 655 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 FMODQ06828 376 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 KRR1Q13601 381 aaKnown RBP14.68□□□□□ -0.06
UBE3D-204ENST00000430071 RCN1Q15293 331 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 SWI5Q1ZZU3 235 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 KDM4DQ6B0I6 523 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 ZNF544Q6NX49 715 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 PTCHD4Q6ZW05 846 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 ZNF525Q8N782 197 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 OR52L1Q8NGH7 329 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 OR4Q3Q8NH05 313 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 NANOS1Q8WY41 292 aaKnown RBP14.68□□□□□ -0.06
UBE3D-204ENST00000430071 CIB1Q99828 191 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 OBP2BQ9NPH6 170 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 B3GAT2Q9NPZ5 323 aa14.68□□□□□ -0.06
UBE3D-204ENST00000430071 PAPOLBQ9NRJ5 636 aaKnown RBP14.68□□□□□ -0.06
UBE3D-204ENST00000430071 STX18Q9P2W9 335 aaKnown RBP14.68□□□□□ -0.06
UBE3D-204ENST00000430071 IGKV1D-43A0A0B4J1Z2 117 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 H3BN98 237 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 SLC2A10O95528 541 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 QDPRP09417 244 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 ANPEPP15144 967 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 CDKN2AP42771 156 aaKnown RBP14.67□□□□□ -0.06
UBE3D-204ENST00000430071 IDH3GP51553 393 aaPredicted RBP14.67□□□□□ -0.06
UBE3D-204ENST00000430071 ZNF133P52736 654 aaPredicted RBP14.67□□□□□ -0.06
UBE3D-204ENST00000430071 NUDT6P53370 316 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 CD47Q08722 323 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 ETFDHQ16134 617 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 VHLLQ6RSH7 139 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 MDP1Q86V88 176 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 IQCF1Q8N6M8 205 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 OR10H5Q8NGA6 315 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 DNAJC9Q8WXX5 260 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 MCHR2Q969V1 340 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 ALG12Q9BV10 488 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 OSBPL10Q9BXB5 764 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 ZNF224Q9NZL3 707 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 POFUT2Q9Y2G5 429 aa14.67□□□□□ -0.06
UBE3D-204ENST00000430071 SLC22A23A1A5C7 686 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 PRSS37A4D1T9 235 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 ZNF99A8MXY4 864 aaPredicted RBP14.66□□□□□ -0.06
UBE3D-204ENST00000430071 XKRYO14609 159 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 DHHO43323 396 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 IDH3BO43837 385 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 IGKV3-15P01624 115 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 HLA-HP01893 362 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 HIST1H1CP16403 213 aaKnown RBP14.66□□□□□ -0.06
UBE3D-204ENST00000430071 POU1F1P28069 291 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 SH3BGRP55822 239 aaPredicted RBP14.66□□□□□ -0.06
UBE3D-204ENST00000430071 NPRL3Q12980 569 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 ATRQ13535 2644 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 RAB35Q15286 201 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 SLC35F1Q5T1Q4 408 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 ADCK1Q86TW2 530 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 PARP8Q8N3A8 854 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 LNX2Q8N448 690 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 FGFBP3Q8TAT2 258 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 TEX47Q8TBZ9 253 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 ZNF75AQ96N20 296 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 KRT84Q9NSB2 600 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms