RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 RAC1P63000 192 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 EBPQ15125 230 aaKnown RBP12□□□□□ -0.49
SNRNP200-202ENST00000429650 RAB11BQ15907 218 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 SGCBQ16585 318 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 C2orf76Q3KRA6 126 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 NHLRC3Q5JS37 347 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 TEX30Q5JUR7 227 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 FAM198BQ6UWH4 519 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 C3P1Q6ZMU1 363 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 C9orf40Q8IXQ3 194 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 ASB17Q8WXJ9 295 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 PPP1R14AQ96A00 147 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 CCDC120Q96HB5 630 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 KCNN3Q9UGI6 736 aa12□□□□□ -0.49
SNRNP200-202ENST00000429650 CPAMD8Q8IZJ3 1885 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 LOC100289279A0A1B0GTE1 492 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 UBE2QL1A1L167 161 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 MEIS3P1A6NDR6 274 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 B8ZZF3 427 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 ALG1L2C9J202 215 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 TSPAN2O60636 221 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 SLC25A12O75746 678 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 SCO1O75880 301 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 MT-ATP6P00846 226 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 RLN1P04808 185 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 GTF2F2P13984 249 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 NME1P15531 152 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 NR0B1P51843 470 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 INSM1Q01101 510 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 ZP2Q05996 745 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 C2orf68Q2NKX9 166 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 FAM166AQ6J272 317 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 SLC18B1Q6NT16 456 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 DBX2Q6ZNG2 339 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 CHMP1BQ7LBR1 199 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 GKN2Q86XP6 184 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 OR5M1Q8NGP8 315 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 OR6N1Q8NGY5 312 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 CHRNA10Q9GZZ6 450 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 OPN4Q9UHM6 478 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 GTF2A1LQ9UNN4 478 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 COL5A1P20908 1838 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 IGLV1-36A0A0B4J1U3 117 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 A0A1W2PQD3 144 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 OR6C65A6NJZ3 312 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 H3BMH7 237 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 EIF4E2O60573 245 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 SLC16A7O60669 478 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 SPARCP09486 303 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 AKAIN1P0CW23 69 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 GP1BBP13224 206 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 PGCP20142 388 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 H2BFSP57053 126 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 ELAVL1Q15717 326 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 SLC38A6Q8IZM9 456 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 OR51S1Q8NGJ8 323 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 PNPLA2Q96AD5 504 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 MSANTD3Q96H12 275 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 NKX3-1Q99801 234 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 EPHA6Q9UF33 1036 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 KIF25Q9UIL4 384 aa11.99□□□□□ -0.49
SNRNP200-202ENST00000429650 TMEM272A0A1B0GTI8 110 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 TTLL8A6PVC2 850 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 SUSD5O60279 629 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 SNAPC5O75971 98 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 RGS11O94810 467 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 SIX6O95475 246 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 CTLA4P16410 223 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 PRSS3P35030 304 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 DCAF7P61962 342 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 ROM1Q03395 351 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 MFGE8Q08431 387 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 PLCXD2Q0VAA5 305 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 ETFDHQ16134 617 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 HDDC2Q7Z4H3 204 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 PLPP7Q8NBV4 271 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 C8orf44Q96CB5 159 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 TBL1XR1Q9BZK7 514 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 SLC17A5Q9NRA2 495 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 ZNF224Q9NZL3 707 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 VSX1Q9NZR4 365 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 LUZP4Q9P127 313 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 DHCR7Q9UBM7 475 aaKnown RBP11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 FREM3P0C091 2139 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 NPIPB7O75200 414 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 OR6A2O95222 327 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 WNT11O96014 354 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 CD3DP04234 171 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 FCER2P06734 321 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 PRKACAP17612 351 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 SEC61A1P61619 476 aaKnown RBP11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 OC90Q02509 493 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 MFSD13AQ14CX5 517 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 RAB30Q15771 203 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 PRAMEF17Q5VTA0 474 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 HLA-DQA1Q5Y7H0 255 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 TMEM225Q6GV28 225 aa11.98□□□□□ -0.49
SNRNP200-202ENST00000429650 NDUFAF7Q7L592 441 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms