RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 HS3ST2Q9Y278 367 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 A0A087WUU8 490 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 ZNF816-ZNF321PA0A0X1KG74 233 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 HLA-HP01893 362 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 ACHEP22303 614 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 AADACP22760 399 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 ZNF321PQ8N8H1 164 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 WFDC5Q8TCV5 224 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 NKX3-1Q99801 234 aaPredicted RBP13.3□□□□□ -0.28
PTPRU-204ENST00000428026 SLCO5A1Q9H2Y9 848 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 DUSP21Q9H596 190 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 HRASLSQ9HDD0 168 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 CHST11Q9NPF2 352 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 FBXL4Q9UKA2 621 aa13.3□□□□□ -0.28
PTPRU-204ENST00000428026 SOX18P35713 384 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 CDC20Q12834 499 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 FAM71E1Q6IPT2 247 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 SEMA4CQ9C0C4 833 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 MT-ND4LP03901 98 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 FABP5Q01469 135 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 MFAP5Q13361 173 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 TRIM61Q5EBN2 209 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 PRAMEF20Q5VT98 475 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 MED25Q71SY5 747 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 DCXRQ7Z4W1 244 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 TMEM123Q8N131 208 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 YIPF6Q96EC8 236 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 IKZF5Q9H5V7 419 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 LRIT1Q9P2V4 623 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 MCTS1Q9ULC4 181 aaKnown RBP13.29□□□□□ -0.28
PTPRU-204ENST00000428026 BCORQ6W2J9 1755 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 TCRBV5S2A0A599 114 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 PIPP12273 146 aaPredicted RBP13.29□□□□□ -0.28
PTPRU-204ENST00000428026 CPN1P15169 458 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 EPHA2P29317 976 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 PSMB3P49720 205 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 CATR1Q13166 79 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 OR5M8Q8NGP6 311 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 OBP2AQ9NY56 170 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 ASB1Q9Y576 335 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 TMEM200CA6NKL6 621 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 ZNF195O14628 629 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 PRAMEF4O60810 478 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 SBK2P0C263 348 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 GZMKP49863 264 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 WDR5BQ86VZ2 330 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 OR8U1Q8NH10 309 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 OPALINQ96PE5 141 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 ABHD6Q9BV23 337 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 HINT3Q9NQE9 182 aaKnown RBP13.29□□□□□ -0.28
PTPRU-204ENST00000428026 THAP10Q9P2Z0 257 aaPredicted RBP13.29□□□□□ -0.28
PTPRU-204ENST00000428026 CNTRLQ7Z7A1 2325 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 TMED7-TICAM2A0A0A6YYA0 188 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 NME1P15531 152 aaKnown RBP13.29□□□□□ -0.28
PTPRU-204ENST00000428026 CLDN20P56880 219 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 SLC10A1Q14973 349 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 MAP3K3Q99759 626 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 FOXQ1Q9C009 403 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 AUNIPQ9H7T9 357 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 TMED7Q9Y3B3 224 aa13.29□□□□□ -0.28
PTPRU-204ENST00000428026 RNF212BA8MTL3 300 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 GLCEO94923 617 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 H2AFB1P0C5Y9 115 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 ALOX5APP20292 161 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 MRPL19P49406 292 aaKnown RBP13.28□□□□□ -0.28
PTPRU-204ENST00000428026 RAB38P57729 211 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 SNRPNP63162 240 aaKnown RBP13.28□□□□□ -0.28
PTPRU-204ENST00000428026 ARG2P78540 354 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 DHRS9Q9BPW9 319 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 TIMM29Q9BSF4 260 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 CDCA4Q9BXL8 241 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 TAS2R4Q9NYW5 299 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 CBY1Q9Y3M2 126 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 A0A087WV62 115 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 CD14P08571 375 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 TMEM11P17152 192 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 FOLR3P41439 243 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 ZNF77Q15935 545 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 CLEC12BQ2HXU8 276 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 LIPNQ5VXI9 398 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 Q6ZRG5 221 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 DUSP23Q9BVJ7 150 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 EVA1AQ9H8M9 152 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 EVPLQ92817 2033 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 G3V3Y1 287 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 PTAFRP25105 342 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 SNCAP37840 140 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 AKR1C3P42330 323 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 REEP5Q00765 189 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 OVCH1Q7RTY7 1134 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 FAM71CQ8NEG0 241 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 NEURL2Q9BR09 285 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 MUTYHQ9UIF7 546 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 DOCK2Q92608 1830 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 MYO5AQ9Y4I1 1855 aaKnown RBP13.28□□□□□ -0.28
PTPRU-204ENST00000428026 TRAV36DV7A0A075B6V5 113 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 PLSCR5A0PG75 271 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 PPP5D1E7EU14 171 aa13.28□□□□□ -0.28
PTPRU-204ENST00000428026 GALR3O60755 368 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-204ENST00000428026 UTS2O95399 124 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms