RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 PRDX1Q06830 199 aaKnown RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 SPHARQ15513 63 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OR4D1Q15615 310 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 UNC50Q53HI1 259 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ADGRF3Q8IZF5 1079 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 FBXL6Q8N531 539 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OR4M1Q8NGD0 313 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OR1E3Q8WZA6 343 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 NT5C3BQ969T7 300 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 BTF3L4Q96K17 158 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 PEBP4Q96S96 227 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OR11A1Q9GZK7 315 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 COMMD5Q9GZQ3 224 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 LHPPQ9H008 270 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ARL6Q9H0F7 186 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 SIAEQ9HAT2 523 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ACKR4Q9NPB9 350 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ZNF275Q9NSD4 429 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 WBP1LQ9NX94 342 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 COL16A1Q07092 1604 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 SULT1C2O00338 296 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 EIF4E2O60573 245 aaKnown RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 NCR1O76036 304 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 GABRA1P14867 456 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 HOXD9P28356 352 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 CD1CP29017 333 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 MEOX1P50221 254 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 TAS2R19P59542 299 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 C18orf21Q32NC0 220 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 THSD4Q6ZMP0 1018 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 MEPCEQ7L2J0 689 aaKnown RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 FCRLAQ7L513 359 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OVCH2Q7RTZ1 564 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 LILRA2Q8N149 483 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OR2M7Q8NG81 312 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OR7G3Q8NG95 312 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OR7G2Q8NG99 324 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OR11G2Q8NGC1 345 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 RAB3CQ96E17 227 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 EBF4Q9BQW3 602 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ZNF436Q9C0F3 470 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 PCED1AQ9H1Q7 454 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 TUBG2Q9NRH3 451 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ASF1BQ9NVP2 202 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 AIG1Q9NVV5 245 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 PPP1R3CQ9UQK1 317 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 PPIL1Q9Y3C6 166 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ENPP4Q9Y6X5 453 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 V9GY05 133 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ANKRD26Q9UPS8 1709 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 HELTA6NFD8 242 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 CRXO43186 299 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 CACNG3O60359 315 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 VAMP5O95183 116 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 HBE1P02100 147 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 F13BP05160 661 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 SLC35E2P0CK97 266 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 IVDP26440 423 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 SUMO3P55854 103 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 CLDN15P56746 228 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 CXCR4P61073 352 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 TNK1Q13470 666 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 SELPLGQ14242 412 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 GK2Q14410 553 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 KCNAB1Q14722 419 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 RTP5Q14D33 572 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 SMIM21Q3B7S5 101 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 SFRP4Q6FHJ7 346 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 H1FNTQ75WM6 255 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 TIPARPQ7Z3E1 657 aaKnown RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 VRK2Q86Y07 508 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 RNF113BQ8IZP6 322 aaKnown RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 CYB561A3Q8NBI2 242 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 FBXL17Q9UF56 701 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 TEX264Q9Y6I9 313 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 STYXL1Q9Y6J8 313 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 COL2A1P02458 1487 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 IGHV3-20A0A0C4DH32 117 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 CTXN2P0C2S0 81 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 TPT1P13693 172 aaKnown RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 RAB6AP20340 208 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 BLOC1S1P78537 153 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 COL9A3Q14050 684 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 BATFQ16520 125 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 RNFT1Q5M7Z0 435 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 MRPL2Q5T653 305 aaKnown RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 C19orf35Q6ZS72 473 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 SLC35D2Q76EJ3 337 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 CPOQ8IVL8 374 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 PQLC3Q8N755 202 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ZFP41Q8N8Y5 198 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 GPR26Q8NDV2 337 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OR13C8Q8NGS7 320 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 OR2T11Q8NH01 316 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ZBTB8AQ96BR9 441 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 C20orf85Q9H1P6 137 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 CHST8Q9H2A9 424 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ARV1Q9H2C2 271 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 NMNAT1Q9HAN9 279 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 RNF150Q9ULK6 438 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms