RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 C1orf21Q9H246 121 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 SYT4Q9H2B2 425 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 OR52D1Q9H346 318 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 MUC13Q9H3R2 512 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 ZNF442Q9H7R0 627 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 SIAEQ9HAT2 523 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 EMC7Q9NPA0 242 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 KRCC1Q9NPI7 259 aaPredicted RBP11.75□□□□□ -0.53
SNX3-204ENST00000426155 MYEF2Q9P2K5 600 aaKnown RBP11.75□□□□□ -0.53
SNX3-204ENST00000426155 TMCC3Q9ULS5 477 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 TMEM129A0AVI4 362 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 PRSS37A4D1T9 235 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 B9A039 149 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 ANKRD65E5RJM6 399 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 TNFRSF11BO00300 401 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 XKRYO14609 159 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 ACOT8O14734 319 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 GPANK1O95872 356 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 IGFBP1P08833 259 aaPredicted RBP11.74□□□□□ -0.53
SNX3-204ENST00000426155 NR2C1P13056 603 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 FPR3P25089 353 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 APEX1P27695 318 aaKnown RBP11.74□□□□□ -0.53
SNX3-204ENST00000426155 GSSP48637 474 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 ERFP50548 548 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 ENDOGQ14249 297 aaKnown RBP11.74□□□□□ -0.53
SNX3-204ENST00000426155 EFNB3Q15768 340 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 NRN1LQ496H8 165 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 SMARCD3Q6STE5 483 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 CLEC9AQ6UXN8 241 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 FOXL2NBQ6ZUU3 175 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 BIVMQ86UB2 503 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 IL17RDQ8NFM7 739 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 OR4C15Q8NGM1 316 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 SAMD8Q96LT4 415 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 TSSK2Q96PF2 358 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 VRK1Q99986 396 aaPredicted RBP11.74□□□□□ -0.53
SNX3-204ENST00000426155 SYT3Q9BQG1 590 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 ZNF416Q9BWM5 594 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 NDEL1Q9GZM8 345 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 PLK3Q9H4B4 646 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 RERGLQ9H628 205 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 EGLN3Q9H6Z9 239 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 BARX1Q9HBU1 254 aaPredicted RBP11.74□□□□□ -0.53
SNX3-204ENST00000426155 CCNB1IP1Q9NPC3 277 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 PMF1-BGLAPU3KQ54 211 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 U3KQV3 271 aa11.74□□□□□ -0.53
SNX3-204ENST00000426155 YLPM1P49750 1951 aaKnown RBP11.74□□□□□ -0.53
SNX3-204ENST00000426155 GYG2O15488 501 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 ENTPD5O75356 428 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 LY6G6DO95868 133 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 CDKN2AP42771 156 aaKnown RBP11.73□□□□□ -0.53
SNX3-204ENST00000426155 PSG4Q00888 419 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 GALK2Q01415 458 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 HSF2Q03933 536 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 MAD2L1BPQ15013 274 aaPredicted RBP11.73□□□□□ -0.53
SNX3-204ENST00000426155 FAM27BQ5VT28 67 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 C1orf94Q6P1W5 598 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 DPY19L2P2Q6ZN68 376 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 ZNF620Q6ZNG0 422 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 ADGRG5Q8IZF4 528 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 MRPL24Q96A35 216 aaKnown RBP11.73□□□□□ -0.53
SNX3-204ENST00000426155 ERMAPQ96PL5 475 aaPredicted RBP11.73□□□□□ -0.53
SNX3-204ENST00000426155 PLA2G12AQ9BZM1 189 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 WNT5BQ9H1J7 359 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 FN3KQ9H479 309 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 MAGIXQ9H6Y5 334 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 CDH20Q9HBT6 801 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 POLE4Q9NR33 117 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 SLC7A8Q9UHI5 535 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 FBXL3Q9UKT7 428 aa11.73□□□□□ -0.53
SNX3-204ENST00000426155 CSPG4Q6UVK1 2322 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 NIPBLQ6KC79 2804 aaeCLIP11.72□□□□□ -0.53
SNX3-204ENST00000426155 LOC100509620A0A075B734 347 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 IQCMA0A1B0GVH7 501 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 DCTN6O00399 190 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 SLC16A7O60669 478 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 MPZL1O95297 269 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 BMP4P12644 408 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 MSR1P21757 451 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 CCNOP22674 350 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 SLC6A6P31641 620 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 RPS6KA3P51812 740 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 EFNA4P52798 201 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 KRTAP1-1Q07627 177 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 TSPAN31Q12999 210 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 RFX4Q33E94 735 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 FAM98BQ52LJ0 330 aaKnown RBP11.72□□□□□ -0.53
SNX3-204ENST00000426155 CLEC12AQ5QGZ9 265 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 GPR139Q6DWJ6 353 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 ZNF770Q6IQ21 691 aaPredicted RBP11.72□□□□□ -0.53
SNX3-204ENST00000426155 ZNF774Q6NX45 483 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 DPPA2Q7Z7J5 298 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 ICA1LQ8NDH6 482 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 OR8D4Q8NGM9 314 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 FNDC8Q8TC99 324 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 GNPDA2Q8TDQ7 276 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 LRGUKQ96M69 825 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 DOK1Q99704 481 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 IFT27Q9BW83 186 aa11.72□□□□□ -0.53
SNX3-204ENST00000426155 REG4Q9BYZ8 158 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms