RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 UBE2MP61081 183 aaKnown RBP11.75□□□□□ -0.53
COL12A1-205ENST00000425443 ZP2Q05996 745 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 NSDHLQ15738 373 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 SLC35D3Q5M8T2 416 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 LINC01590Q5TEZ4 76 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 PWWP2BQ6NUJ5 590 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 SLC35D2Q76EJ3 337 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 OR51A4Q8NGJ6 313 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 PTPMT1Q8WUK0 201 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-205ENST00000425443 EDARADDQ8WWZ3 215 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 SLC46A1Q96NT5 459 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 OR1F2PQ96R84 312 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 MYEF2Q9P2K5 600 aaKnown RBP11.75□□□□□ -0.53
COL12A1-205ENST00000425443 AIPO00170 330 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 TACSTD2P09758 323 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 SRFP11831 508 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 CDK2P24941 298 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 TACR3P29371 465 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 LCN1P31025 176 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 GPX4P36969 197 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-205ENST00000425443 GNALP38405 381 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 CSNK1EP49674 416 aaKnown RBP11.75□□□□□ -0.53
COL12A1-205ENST00000425443 P2RX1P51575 399 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 NR0B1P51843 470 aaKnown RBP11.75□□□□□ -0.53
COL12A1-205ENST00000425443 SLC37A1P57057 533 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 OR1D5P58170 312 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 C1orf189Q5VU69 101 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 LIPNQ5VXI9 398 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 OR5M10Q6IEU7 315 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 FAM198BQ6UWH4 519 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 DPY19L4Q7Z388 723 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 AKR7LQ8NHP1 331 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 LCORQ96JN0 433 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-205ENST00000425443 DMRTA2Q96SC8 542 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 PFDN5Q99471 154 aa11.75□□□□□ -0.53
COL12A1-205ENST00000425443 SLC25A12O75746 678 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 SIX6O95475 246 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 LDOC1O95751 146 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-205ENST00000425443 CD14P08571 375 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 RRASP10301 218 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 SQSTM1Q13501 440 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 ZNF74Q16587 644 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 ZNF684Q5T5D7 378 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 COL13A1Q5TAT6 717 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-205ENST00000425443 BIVMQ86UB2 503 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 GPAT4Q86UL3 456 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 DPYSL5Q9BPU6 564 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 TBL1XR1Q9BZK7 514 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 PLEKHA1Q9HB21 404 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 NOX3Q9HBY0 568 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 MGAT4CQ9UBM8 478 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 SLC6A5Q9Y345 797 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 M0R233 179 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 TGM6O95932 706 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 S100A9P06702 114 aaKnown RBP11.74□□□□□ -0.53
COL12A1-205ENST00000425443 RAB13P51153 203 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 BIKQ13323 160 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 TDGQ13569 410 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 C14orf28Q4W4Y0 310 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 VWA2Q5GFL6 755 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 RPS4Y2Q8TD47 263 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 NARS2Q96I59 477 aaKnown RBP11.74□□□□□ -0.53
COL12A1-205ENST00000425443 CXorf58Q96LI9 332 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 NMNAT2Q9BZQ4 307 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 SYT4Q9H2B2 425 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 CLEC4MQ9H2X3 399 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-205ENST00000425443 WDR76Q9H967 626 aa11.74□□□□□ -0.53
COL12A1-205ENST00000425443 PCDH15Q96QU1 1955 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 IGKV1D-42A0A075B6H8 117 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 A0A1W2PPL8 197 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 ICOSLGO75144 302 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 IFNA7P01567 189 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 C1QL3Q5VWW1 255 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 ATG4DQ86TL0 474 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-205ENST00000425443 ZNF676Q8N7Q3 588 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 CLRN3Q8NCR9 226 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 C2CD4CQ8TF44 421 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 RBPMSQ93062 196 aaKnown RBP11.73□□□□□ -0.53
COL12A1-205ENST00000425443 KTI12Q96EK9 354 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-205ENST00000425443 C7orf50Q9BRJ6 194 aaKnown RBP11.73□□□□□ -0.53
COL12A1-205ENST00000425443 SLITRK2Q9H156 845 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 MMP25Q9NPA2 562 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 FAM212BQ9NTI7 297 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-205ENST00000425443 PTTG3PQ9NZH4 202 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 COPS7AQ9UBW8 275 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 V9GY05 133 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 TRAV8-7A0A075B6U6 113 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 PLSCR5A0PG75 271 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 ANKRD20A5PA0PJZ0 165 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 LMO7DNF2Z398 122 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 GABARAPH6UMI1 98 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 RENP00797 406 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 RLN1P04808 185 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 VSIG10L2P0DP72 767 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 CBR1P16152 277 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 NUP62P37198 522 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-205ENST00000425443 SKP2Q13309 424 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 MELKQ14680 651 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 OPCMLQ14982 345 aa11.73□□□□□ -0.53
COL12A1-205ENST00000425443 PPA1Q15181 289 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms