RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 POLE4Q9NR33 117 aa12.89□□□□□ -0.35
TMEM248-204ENST00000424964 B9D1Q9UPM9 204 aa12.89□□□□□ -0.35
TMEM248-204ENST00000424964 DSCAMO60469 2012 aa12.89□□□□□ -0.35
TMEM248-204ENST00000424964 FBN2P35556 2912 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 C12orf71A8MTZ7 269 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 FAM171A2A8MVW0 826 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 SHISA9B4DS77 424 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 DCTN6O00399 190 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 MPZL1O95297 269 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 HMGN1P05114 100 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 SCG5P05408 212 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 CST2P09228 141 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 ZNF3P17036 446 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 CDH11P55287 796 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 NAAAQ02083 359 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 HSF2Q03933 536 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 PLP2Q04941 152 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 DBPQ10586 325 aaPredicted RBP12.88□□□□□ -0.35
TMEM248-204ENST00000424964 CRMP1Q14194 572 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 ZNF672Q499Z4 452 aaPredicted RBP12.88□□□□□ -0.35
TMEM248-204ENST00000424964 ZNF362Q5T0B9 420 aaPredicted RBP12.88□□□□□ -0.35
TMEM248-204ENST00000424964 TMEM236Q5W0B7 351 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 ACSM5Q6NUN0 579 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 UGT2A3Q6UWM9 527 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.88□□□□□ -0.35
TMEM248-204ENST00000424964 CDH24Q86UP0 819 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 MYPOPQ86VE0 399 aaPredicted RBP12.88□□□□□ -0.35
TMEM248-204ENST00000424964 IL17RDQ8NFM7 739 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 LILRB1Q8NHL6 650 aaPredicted RBP12.88□□□□□ -0.35
TMEM248-204ENST00000424964 OTULINQ96BN8 352 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 FBXO17Q96EF6 278 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 TEX12Q9BXU0 123 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 CISD1Q9NZ45 108 aaKnown RBP12.88□□□□□ -0.35
TMEM248-204ENST00000424964 FBXL3Q9UKT7 428 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 PLEKHA6Q9Y2H5 1048 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 FKBP7Q9Y680 259 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 NOTCH2Q04721 2471 aa12.88□□□□□ -0.35
TMEM248-204ENST00000424964 ITPR2Q14571 2701 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 IGLV1-36A0A0B4J1U3 117 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 IQCMA0A1B0GVH7 501 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 ATP6V1G2-DDX39BF2Z307 99 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 MITFO75030 526 aaPredicted RBP12.87□□□□□ -0.35
TMEM248-204ENST00000424964 GPANK1O95872 356 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 PTHP01270 115 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 HLA-DQA2P01906 255 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 SERPINA5P05154 406 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 ZNF14P17017 642 aaPredicted RBP12.87□□□□□ -0.35
TMEM248-204ENST00000424964 ZNF32P17041 273 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 IGFBP5P24593 272 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 PYCR1P32322 319 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 CRISP1P54107 249 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 PCBD1P61457 104 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 ESRRGP62508 458 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 CDK5Q00535 292 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 KEAP1Q14145 624 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 ENDOGQ14249 297 aaKnown RBP12.87□□□□□ -0.35
TMEM248-204ENST00000424964 OTPQ5XKR4 325 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 KDM4DQ6B0I6 523 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 PQLC1Q8N2U9 271 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 PARP8Q8N3A8 854 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 OR9Q1Q8NGQ5 310 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 OR2T4Q8NH00 348 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 C11orf40Q8WZ69 217 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 FBXW5Q969U6 566 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 ZNF75AQ96N20 296 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 DDOQ99489 341 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 ZNF416Q9BWM5 594 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 RACGAP1Q9H0H5 632 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 CMC2Q9NRP2 79 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 ST6GALNAC2Q9UJ37 374 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 POLR1DQ9Y2S0 133 aa12.87□□□□□ -0.35
TMEM248-204ENST00000424964 RTTNQ86VV8 2226 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 APCP25054 2843 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 IGHV2OR16-5A0A0B4J2B6 119 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 E7EQL1 145 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 RAF1P04049 648 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 MMP7P09237 267 aaPredicted RBP12.86□□□□□ -0.35
TMEM248-204ENST00000424964 DNASE1P24855 282 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 CALCRP30988 508 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 GLO1Q04760 184 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 PABPC1L2AQ5JQF8 200 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 PAMR1Q6UXH9 720 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 C20orf204Q6ZNR8 217 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 ZBTB46Q86UZ6 589 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 ZNF611Q8N823 705 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 PROKR2Q8NFJ6 384 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 OR10H5Q8NGA6 315 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 AKR7LQ8NHP1 331 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 PLEKHA8Q96JA3 519 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 CIB1Q99828 191 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 RBM4BQ9BQ04 359 aaKnown RBP12.86□□□□□ -0.35
TMEM248-204ENST00000424964 RBM4Q9BWF3 364 aaKnown RBP12.86□□□□□ -0.35
TMEM248-204ENST00000424964 OSBPL10Q9BXB5 764 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 SLC25A19Q9HC21 320 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 ENOPH1Q9UHY7 261 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 TIMM10BQ9Y5J6 103 aa12.86□□□□□ -0.35
TMEM248-204ENST00000424964 PLCE1Q9P212 2302 aa12.85□□□□□ -0.35
TMEM248-204ENST00000424964 FAM183AA6NL82 134 aa12.85□□□□□ -0.35
TMEM248-204ENST00000424964 GYPBP06028 91 aa12.85□□□□□ -0.35
TMEM248-204ENST00000424964 PAICSP22234 425 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms