RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RNF121Q9H920 327 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 CHODLQ9H9P2 273 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 REV1Q9UBZ9 1251 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 HIF3AQ9Y2N7 669 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 UGT2A1Q9Y4X1 527 aa13.05□□□□□ -0.32
USB1-202ENST00000423271 LOC100289279A0A1B0GTE1 492 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 DHRS12A0PJE2 317 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 CENPBD1B2RD01 187 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 M0R233 179 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 LMX1BO60663 402 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 ENTPD5O75356 428 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 GADD45GO95257 159 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 FAM157BP0CG42 384 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 GIFP27352 417 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 IL2RGP31785 369 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 CDAP32320 146 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 GPR4P46093 362 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 EVX1P49640 407 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 ZNF84P51523 738 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 ZNF133P52736 654 aaPredicted RBP13.04□□□□□ -0.32
USB1-202ENST00000423271 RPS23P62266 143 aaKnown RBP13.04□□□□□ -0.32
USB1-202ENST00000423271 SLC36A2Q495M3 483 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 ALG10Q5BKT4 473 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 C10orf128Q5T292 105 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 TMEM53Q6P2H8 277 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 IL17RELQ6ZVW7 336 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 HDDC2Q7Z4H3 204 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 IGFN1Q86VF2 1251 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 ZNF786Q8N393 782 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 LRRC18Q8N456 261 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 CLDN22Q8N7P3 220 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 UBASH3BQ8TF42 649 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 CANT1Q8WVQ1 401 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 MMADHCQ9H3L0 296 aaPredicted RBP13.04□□□□□ -0.32
USB1-202ENST00000423271 TMEM160Q9NX00 188 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 CDC42EP3Q9UKI2 254 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 AURKCQ9UQB9 309 aa13.04□□□□□ -0.32
USB1-202ENST00000423271 TCRBV3S1A0A5B6 114 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 HTR3EA5X5Y0 456 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 NPIPB13A6NJU9 1138 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 EFCAB9A8MZ26 197 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 NPIPB4C9JG80 1138 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 LILRA1O75019 489 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 HPXP02790 462 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 MMP7P09237 267 aaPredicted RBP13.03□□□□□ -0.32
USB1-202ENST00000423271 FAM157CP0CG43 387 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 RAP2AP10114 183 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 SMIM11AP58511 58 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 ERVS71-1P61550 626 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 CD47Q08722 323 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 RIN1Q13671 783 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 TRIP10Q15642 601 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 ALKBH6Q3KRA9 238 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 NRN1LQ496H8 165 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 FAM166AQ6J272 317 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 RRM2BQ7LG56 351 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 ZNF540Q8NDQ6 660 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 NSMAFQ92636 917 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 UTP4Q969X6 686 aaKnown RBP13.03□□□□□ -0.32
USB1-202ENST00000423271 NABP1Q96AH0 204 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 TXNIPQ9H3M7 391 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 CDH20Q9HBT6 801 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 DUSP13Q9UII6 198 aa13.03□□□□□ -0.32
USB1-202ENST00000423271 TRAV27A0A087WT01 109 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 A0A1W2PPW3 197 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 NCR1O76036 304 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 CLPTM1O96005 669 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 IGHMP01871 453 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 TACSTD2P09758 323 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 SAGP10523 405 aaPredicted RBP13.02□□□□□ -0.33
USB1-202ENST00000423271 NAT2P11245 290 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 OMPP47874 163 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 LIMS1P48059 325 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 MRPS34P82930 218 aaKnown RBP13.02□□□□□ -0.33
USB1-202ENST00000423271 FHL1Q13642 323 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 ELFN2Q5R3F8 820 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 RGS7BPQ6MZT1 257 aaPredicted RBP13.02□□□□□ -0.33
USB1-202ENST00000423271 SLC25A47Q6Q0C1 308 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 DPPA2Q7Z7J5 298 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 LRRC75AQ8NAA5 344 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 OR13C2Q8NGS9 318 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 OR51A7Q8NH64 312 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 FAM46AQ96IP4 442 aaKnown RBP13.02□□□□□ -0.33
USB1-202ENST00000423271 TSPAN32Q96QS1 320 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 SNX18Q96RF0 628 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 CHID1Q9BWS9 393 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 BEX2Q9BXY8 128 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 SHARPINQ9H0F6 387 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 C1orf198Q9H425 327 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 VNN3Q9NY84 501 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 STX18Q9P2W9 335 aaKnown RBP13.02□□□□□ -0.33
USB1-202ENST00000423271 KCNS2Q9ULS6 477 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 TMEM5Q9Y2B1 443 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 LYVE1Q9Y5Y7 322 aa13.02□□□□□ -0.33
USB1-202ENST00000423271 TNFRSF11BO00300 401 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 CDC42EP2O14613 210 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 SNAP29O95721 258 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 IFNA2P01563 188 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 ZNF32P17041 273 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 APEX1P27695 318 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms