RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 GUCA1AP43080 201 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-202ENST00000422991 KIR2DL3P43628 341 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 AQP4P55087 323 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 UBE2NP61088 152 aaKnown RBP14.85□□□□□ -0.03
COL7A1-202ENST00000422991 ADARB1P78563 741 aaKnown RBP14.85□□□□□ -0.03
COL7A1-202ENST00000422991 PPA1Q15181 289 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 KCNMB1Q16558 191 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 SGCAQ16586 387 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 FAM27BQ5VT28 67 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 SSX8Q7RTT4 187 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 SLC26A10Q8NG04 563 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 OR51L1Q8NGJ5 315 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 OR8J1Q8NGP2 316 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 CYGBQ8WWM9 190 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 MUCL1Q96DR8 90 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 DACH2Q96NX9 599 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 IL4I1Q96RQ9 567 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 SH3GL3Q99963 347 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 ADI1Q9BV57 179 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 IMPAD1Q9NX62 359 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 CRIM1Q9NZV1 1036 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 DCHS2Q6V1P9 2916 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 PRODHO43272 600 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 MPZL1O95297 269 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 CENPAP49450 140 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 TUBA1BP68363 451 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 TUBA4AP68366 448 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 LINC01590Q5TEZ4 76 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 TTC23Q5W5X9 447 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 TUBA1AQ71U36 451 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 DHRSXQ8N5I4 330 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 FAM222BQ8WU58 562 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 NANOS1Q8WY41 292 aaKnown RBP14.84□□□□□ -0.03
COL7A1-202ENST00000422991 C11orf40Q8WZ69 217 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 ZC3HAV1LQ96H79 300 aaKnown RBP14.84□□□□□ -0.03
COL7A1-202ENST00000422991 OR51V1Q9H2C8 321 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 EMC7Q9NPA0 242 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 B3GNT2Q9NY97 397 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 ZNF226Q9NYT6 803 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 MOKQ9UQ07 419 aa14.84□□□□□ -0.03
COL7A1-202ENST00000422991 GLCEO94923 617 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 WNT11O96014 354 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 HLA-HP01893 362 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 TFP02787 698 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 HRGP04196 525 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 CST2P09228 141 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 CAPGP40121 348 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 VHLP40337 213 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 CAPZA2P47755 286 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 SNRPGP62308 76 aaKnown RBP14.83□□□□□ -0.04
COL7A1-202ENST00000422991 HSF2Q03933 536 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 ENDOGQ14249 297 aaKnown RBP14.83□□□□□ -0.04
COL7A1-202ENST00000422991 MEP1BQ16820 701 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 SLC35D3Q5M8T2 416 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 AADACL4Q5VUY2 407 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 NXNL2Q5VZ03 156 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 ZNF787Q6DD87 383 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 UGT2A3Q6UWM9 527 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 LYPD4Q6UWN0 246 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 IZUMO2Q6UXV1 221 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 SLC16A14Q7RTX9 510 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 BCDIN3DQ7Z5W3 292 aaKnown RBP14.83□□□□□ -0.04
COL7A1-202ENST00000422991 DPPA2Q7Z7J5 298 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 WFDC8Q8IUA0 241 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 DEPDC4Q8N2C3 294 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 LRRC18Q8N456 261 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 OR6K6Q8NGW6 343 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 FGFBP3Q8TAT2 258 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 TRUB1Q8WWH5 349 aaKnown RBP14.83□□□□□ -0.04
COL7A1-202ENST00000422991 UBE2FQ969M7 185 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 FBXO17Q96EF6 278 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 ZNF416Q9BWM5 594 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 NOX3Q9HBY0 568 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 SLC24A3Q9HC58 644 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 MRPL22Q9NWU5 206 aaKnown RBP14.83□□□□□ -0.04
COL7A1-202ENST00000422991 NPAP1Q9NZP6 1156 aa14.83□□□□□ -0.04
COL7A1-202ENST00000422991 PKDREJQ9NTG1 2253 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 CCDC182A6NF36 153 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 H0YAE9 185 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 UBL3O95164 117 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 HLA-DQA2P01906 255 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 MMP7P09237 267 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-202ENST00000422991 PATE4P0C8F1 98 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 EPXP11678 715 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 CD79AP11912 226 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 CRYGSP22914 178 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 FMO3P31513 532 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 BLVRAP53004 296 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 LSM6P62312 80 aaKnown RBP14.82□□□□□ -0.04
COL7A1-202ENST00000422991 TEKQ02763 1124 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 APOFQ13790 326 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 SLC36A2Q495M3 483 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 KLHL12Q53G59 568 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 ZNF691Q5VV52 312 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 OTPQ5XKR4 325 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 SP5Q6BEB4 398 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-202ENST00000422991 MDP1Q86V88 176 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 GID4Q8IVV7 300 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 ENTHD1Q8IYW4 607 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 APOL4Q9BPW4 351 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms