RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 STK35Q8TDR2 534 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 AKAP1Q92667 903 aaKnown RBP eCLIP8.79□□□□□ -1
CMSS1-201ENST00000421999 GHSRQ92847 366 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 COG8Q96MW5 612 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 MBOAT4Q96T53 435 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 TEAD3Q99594 435 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 SLC22A4Q9H015 551 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 COPZ2Q9P299 210 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 ZNF281Q9Y2X9 895 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 TIMM10BQ9Y5J6 103 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 CCDC88CQ9P219 2028 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 BRCA2P51587 3418 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 ATXN7O15265 892 aaPredicted RBP8.79□□□□□ -1
CMSS1-201ENST00000421999 GPRIN2O60269 458 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 NXPH2O95156 264 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 CNR1P21554 472 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 LAP3P28838 519 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 MAGEA5P43359 124 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 FXYD4P59646 89 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 ISL1P61371 349 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 CFHR1Q03591 330 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 CDK10Q15131 360 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 C3AR1Q16581 482 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 C9orf40Q8IXQ3 194 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 SLC38A9Q8NBW4 561 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 FAM71CQ8NEG0 241 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 DEFB108BQ8NET1 73 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 CSNK2A3Q8NEV1 391 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 ZNF420Q8TAQ5 688 aaPredicted RBP8.79□□□□□ -1
CMSS1-201ENST00000421999 FNDC9Q8TBE3 224 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 PSMF1Q92530 271 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 PIGTQ969N2 578 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 TXNIPQ9H3M7 391 aa8.79□□□□□ -1
CMSS1-201ENST00000421999 DNAJB12Q9NXW2 375 aaKnown RBP8.79□□□□□ -1
CMSS1-201ENST00000421999 CENPVL1A0A0U1RR11 272 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 A0A0X1KG70 313 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 CELA2AP08217 269 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 RAC2P15153 192 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 EIF2S3P41091 472 aaKnown RBP8.78□□□□□ -1
CMSS1-201ENST00000421999 PLGLAQ15195 96 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 CD226Q15762 336 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 THEM4Q5T1C6 240 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 MAMSTRQ6ZN01 415 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 OR4D11Q8NGI4 311 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 FBXL3Q9UKT7 428 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 NUP50Q9UKX7 468 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 PCDHGA10Q9Y5H3 936 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 V9GY05 133 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 PTPRQQ9UMZ3 2332 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 TRAV6A0A075B6T7 132 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 A0A1W2PR80 420 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ZC3H12DA2A288 527 aaKnown RBP8.78□□□□□ -1
CMSS1-201ENST00000421999 SLC19A2O60779 497 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ZNF883P0CG24 379 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 HTR1FP30939 366 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 IL2RGP31785 369 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 RAC1P63000 192 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 SNTB2Q13425 540 aaKnown RBP8.78□□□□□ -1
CMSS1-201ENST00000421999 ATP1A1-AS1Q5TC04 95 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 LIPNQ5VXI9 398 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 Q8N402 240 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ZCCHC14Q8WYQ9 949 aaKnown RBP8.78□□□□□ -1
CMSS1-201ENST00000421999 H1FXQ92522 213 aaKnown RBP8.78□□□□□ -1
CMSS1-201ENST00000421999 C3orf49Q96BT1 292 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 FBXO17Q96EF6 278 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
CMSS1-201ENST00000421999 TUBA1CQ9BQE3 449 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ST6GALNAC5Q9BVH7 336 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 A0A1B0GVC2 190 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 M0R135 149 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 PRSS3P35030 304 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ETV5P41161 510 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 AKR1C2P52895 323 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 TMPRSS3P57727 454 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 RBM39Q14498 530 aaKnown RBP8.78□□□□□ -1
CMSS1-201ENST00000421999 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.78□□□□□ -1
CMSS1-201ENST00000421999 EXTL1Q92935 676 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ZNF799Q96GE5 643 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 RNF170Q96K19 258 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 MNTQ99583 582 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 DDA1Q9BW61 102 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ABCG5Q9H222 651 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ING1Q9UK53 422 aaPredicted RBP8.78□□□□□ -1
CMSS1-201ENST00000421999 TMEM212A6NML5 194 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 SBK2P0C263 348 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ANXA3P12429 323 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 CASP3P42574 277 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 AP2S1P53680 142 aaPredicted RBP8.78□□□□□ -1
CMSS1-201ENST00000421999 EDDM3BP56851 147 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 S100A10P60903 97 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 IKZF1Q13422 519 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 SHBQ15464 509 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 MTFR2Q6P444 385 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 FAHD1Q6P587 224 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 BATF2Q8N1L9 274 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ZNF610Q8N9Z0 462 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 GALNT11Q8NCW6 608 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ZNF721Q8TF20 911 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 DCLRE1CQ96SD1 692 aaKnown RBP8.78□□□□□ -1
CMSS1-201ENST00000421999 CMC2Q9NRP2 79 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms