RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 TCEAL6Q6IPX3 200 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 KCTD18Q6PI47 426 aaPredicted RBP9.82□□□□□ -0.84
DDX56-203ENST00000421223 COMMD2Q86X83 199 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 LIX1LQ8IVB5 337 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 TCTE3Q8IZS6 198 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 UXS1Q8NBZ7 420 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 TCEAL3Q969E4 200 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 C4orf45Q96LM5 186 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 OR8B4Q96RC9 309 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 ZMAT3Q9HA38 289 aaKnown RBP9.82□□□□□ -0.84
DDX56-203ENST00000421223 C12orf10Q9HB07 376 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 SDHAF3Q9NRP4 125 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 SEMA5BQ9P283 1151 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 CGGBP1Q9UFW8 167 aaPredicted RBP9.82□□□□□ -0.84
DDX56-203ENST00000421223 ADAMTS9Q9P2N4 1935 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 TMEM265A0A087WTH1 108 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 NPIPB7O75200 414 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 F10P00742 488 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 MYBPHQ13203 477 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 ZNF679Q8IYX0 411 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 JAGN1Q8N5M9 183 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 OR10H5Q8NGA6 315 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 FCAMRQ8WWV6 532 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 DDIT4LQ96D03 193 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 GUCD1Q96NT3 240 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 CMKLR1Q99788 373 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 TGIF2Q9GZN2 237 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 DHDHQ9UQ10 334 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 HSPB11Q9Y547 144 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 LRP12Q9Y561 859 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 ANKUB1A6NFN9 424 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 TMEM212A6NML5 194 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 FAM25EA8MYX2 175 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 CENPBD1B2RD01 187 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 EFNA2O43921 213 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 TOXO94900 526 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 KLK2P20151 261 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 DPP4P27487 766 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 CDAP32320 146 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 GNALP38405 381 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 MMP15P51511 669 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 PRKXP51817 358 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 EFNB2P52799 333 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 PLA1AQ53H76 456 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 OR10K2Q6IF99 312 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 OR8S1Q8NH09 359 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 ZNF519Q8TB69 540 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 CREB3L1Q96BA8 519 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 NECAB3Q96P71 396 aaPredicted RBP9.82□□□□□ -0.84
DDX56-203ENST00000421223 CHIAQ9BZP6 476 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 TRAV18A0A075B6X5 111 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 IGLV1-36A0A0B4J1U3 117 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 TMEM269A0A1B0GVZ9 245 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 ANKRD34BA5PLL1 514 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 LMX1BO60663 402 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 KDM4BO94953 1096 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 H2AFB2P0C5Z0 115 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 SLC2A1P11166 492 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 CRABP1P29762 137 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 DCTDP32321 178 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 BTCP35070 178 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 DNASE1L1P49184 302 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 EGR3Q06889 387 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 RASGEF1BQ0VAM2 473 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 ZNF227Q86WZ6 799 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 DND1Q8IYX4 353 aaKnown RBP9.81□□□□□ -0.84
DDX56-203ENST00000421223 NAT6Q93015 286 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 GNRHR2Q96P88 292 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 RASL10BQ96S79 203 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 SLA2Q9H6Q3 261 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 EMC7Q9NPA0 242 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 LOC101059948A0A1B0GTJ6 334 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 P2RY10O00398 339 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 KRT33AO76009 404 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 H2BFMP0C1H6 154 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 LCN1P31025 176 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 GUCA2AQ02747 115 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 MAB21L1Q13394 359 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 TMEM255AQ5JRV8 349 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 TIGD3Q6B0B8 471 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 ZNF627Q7L945 461 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 UBALD2Q8IYN6 164 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 STK35Q8TDR2 534 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 SLC25A44Q96H78 314 aaPredicted RBP9.81□□□□□ -0.84
DDX56-203ENST00000421223 FANCFQ9NPI8 374 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 MRPL39Q9NYK5 338 aaKnown RBP9.81□□□□□ -0.84
DDX56-203ENST00000421223 TAS2R4Q9NYW5 299 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 KLHL13Q9P2N7 655 aa9.81□□□□□ -0.84
DDX56-203ENST00000421223 C19orf25Q9UFG5 118 aaPredicted RBP9.81□□□□□ -0.84
DDX56-203ENST00000421223 TOX3O15405 576 aaPredicted RBP9.8□□□□□ -0.84
DDX56-203ENST00000421223 FABP7O15540 132 aa9.8□□□□□ -0.84
DDX56-203ENST00000421223 APOBEC1P41238 236 aaKnown RBP9.8□□□□□ -0.84
DDX56-203ENST00000421223 RPS18P62269 152 aaKnown RBP9.8□□□□□ -0.84
DDX56-203ENST00000421223 SLC25A25Q6KCM7 469 aa9.8□□□□□ -0.84
DDX56-203ENST00000421223 TMEM156Q8N614 296 aa9.8□□□□□ -0.84
DDX56-203ENST00000421223 OR51A2Q8NGJ7 313 aa9.8□□□□□ -0.84
DDX56-203ENST00000421223 OR13C3Q8NGS6 347 aa9.8□□□□□ -0.84
DDX56-203ENST00000421223 SLC22A8Q8TCC7 542 aa9.8□□□□□ -0.84
DDX56-203ENST00000421223 SMIM4Q8WVI0 70 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms