RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 DOC2AQ14183 400 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 PON3Q15166 354 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 TRADDQ15628 312 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 RAET1LQ5VY80 246 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 OR4C11Q6IEV9 310 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 FAM45BPQ6NSW5 357 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 SLC25A24Q6NUK1 477 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 BTNL8Q6UX41 500 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 STAC2Q6ZMT1 411 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 SSX8Q7RTT4 187 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 ZNF329Q86UD4 541 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 VSTM4Q8IW00 320 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 BANPQ8N9N5 519 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 C17orf47Q8NEP4 570 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 OR7G1Q8NGA0 311 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 OR4K14Q8NGD5 310 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 OR6K3Q8NGY3 331 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 FAM45AQ8TCE6 357 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 DOK4Q8TEW6 326 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 HSD17B8Q92506 261 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 MUCL1Q96DR8 90 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 OMA1Q96E52 524 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 C11orf24Q96F05 449 aaPredicted RBP4.61□□□□□ -1.67
VPS45-203ENST00000419023 CMTM7Q96FZ5 175 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 FAM71F1Q96KD3 344 aaPredicted RBP4.61□□□□□ -1.67
VPS45-203ENST00000419023 UHRF2Q96PU4 802 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 PTGES2Q9H7Z7 377 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 COQ10BQ9H8M1 238 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 RNF122Q9H9V4 155 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 Q9N2K0 584 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 GLRX2Q9NS18 164 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 GPR173Q9NS66 373 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 FARSBQ9NSD9 589 aaKnown RBP4.61□□□□□ -1.67
VPS45-203ENST00000419023 LYARQ9NX58 379 aaKnown RBP4.61□□□□□ -1.67
VPS45-203ENST00000419023 BCAP29Q9UHQ4 241 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 MCTS1Q9ULC4 181 aaKnown RBP4.61□□□□□ -1.67
VPS45-203ENST00000419023 PACSIN2Q9UNF0 486 aaPredicted RBP4.61□□□□□ -1.67
VPS45-203ENST00000419023 TFR2Q9UP52 801 aa4.61□□□□□ -1.67
VPS45-203ENST00000419023 FOXA2Q9Y261 457 aaPredicted RBP4.61□□□□□ -1.67
VPS45-203ENST00000419023 MRPS18CQ9Y3D5 142 aaKnown RBP4.61□□□□□ -1.67
VPS45-203ENST00000419023 ROS1P08922 2347 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 A0A1W2PRB8 838 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 CTAGE15A4D2H0 777 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 NCF1BA6NI72 391 aaPredicted RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 GOLGA6L10A6NI86 522 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 NCF1CA8MVU1 366 aaPredicted RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 PRSS46E5RG02 174 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 SLCO1B7G3V0H7 640 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 SAP18O00422 153 aaKnown RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 SYNGR3O43761 229 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 SH3BGRLO75368 114 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 STK16O75716 305 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 TTC4O95801 387 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 CGAP01215 116 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 PABPC4LP0CB38 370 aaKnown RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 IGHV4-31P0DP07 118 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 PSMB1P20618 241 aaKnown RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 PCMT1P22061 227 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 CBLP22681 906 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 IL12BP29460 328 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 MDH1P40925 334 aaKnown RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 CDKN2DP55273 166 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 DSCR4P56555 118 aaPredicted RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 CLDN15P56746 228 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 CX3CL1P78423 397 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 CHRNB3Q05901 458 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 SLC3A1Q07837 685 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 DDX39BQ13838 428 aaKnown RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 GGTLC2Q14390 218 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 PDK4Q16654 411 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 LRRC23Q53EV4 343 aaPredicted RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 PDLIM3Q53GG5 364 aaPredicted RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 NCMAPQ5T1S8 102 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 KHDRBS2Q5VWX1 349 aaKnown RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 OR52E8Q6IFG1 317 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 MED27Q6P2C8 311 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 IL17RELQ6ZVW7 336 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 CTAGE6Q86UF2 777 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 ARIH2OSQ8N7S6 290 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 FNDC9Q8TBE3 224 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 RAB3IL1Q8TBN0 382 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 RNF128Q8TEB7 428 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 KCTD4Q8WVF5 259 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 SELENOMQ8WWX9 145 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 GGHQ92820 318 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 RFT1Q96AA3 541 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 GMPPAQ96IJ6 420 aaPredicted RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 COL21A1Q96P44 957 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 URM1Q9BTM9 101 aaKnown RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 AICDAQ9GZX7 198 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 TSPYL1Q9H0U9 437 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 NXF5Q9H1B4 397 aaKnown RBP4.6□□□□□ -1.67
VPS45-203ENST00000419023 TMEM231Q9H6L2 316 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 CXorf21Q9HAI6 301 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 PRODH2Q9UF12 536 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 PSME2Q9UL46 239 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 OARD1Q9Y530 152 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 FKBP7Q9Y680 259 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 FREM3P0C091 2139 aa4.6□□□□□ -1.67
VPS45-203ENST00000419023 IGLV5-45A0A087WSX0 123 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms