RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 CCDC58Q4VC31 144 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 AGAP7PQ5VUJ5 663 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 GGNQ86UU5 652 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 C11orf40Q8WZ69 217 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 RGP1Q92546 391 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 AGAP4Q96P64 663 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR8B4Q96RC9 309 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 TTYH2Q9BSA4 534 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 MROQ9BYG7 248 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.5□□□□□ -0.899e-6■■□□□ 11.4
SMPD4P1-201ENST00000416717 MIXL1Q9H2W2 232 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 SIAEQ9HAT2 523 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 EMC7Q9NPA0 242 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 POLE4Q9NR33 117 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 CENPMQ9NSP4 180 aa9.5□□□□□ -0.89
SMPD4P1-201ENST00000416717 IQCMA0A1B0GVH7 501 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 HPGDSO60760 199 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 SULT1C4O75897 302 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 QDPRP09417 244 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 GAAP10253 952 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 CD53P19397 219 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 GALP22466 123 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 AZGP1P25311 298 aaKnown RBP9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 CD40LGP29965 261 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 PTGS2P35354 604 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 PPP5CP53041 499 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 KCTD20Q7Z5Y7 419 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 CCDC190Q86UF4 302 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 GLB1L2Q8IW92 636 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 PRSS35Q8N3Z0 413 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 ZNF676Q8N7Q3 588 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR10H5Q8NGA6 315 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR2G2Q8NGZ5 317 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR10AC1Q8NH08 325 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR6X1Q8NH79 312 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR5AK2Q8NH90 309 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 MCHR2Q969V1 340 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 MAP6Q96JE9 813 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 MNTQ99583 582 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 ATF6BQ99941 703 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 SLC30A2Q9BRI3 323 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 NAA11Q9BSU3 229 aaPredicted RBP9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 TTTY12Q9BZ98 90 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 SLC25A18Q9H1K4 315 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 NOX4Q9NPH5 578 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 BRD7Q9NPI1 651 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 B3GAT2Q9NPZ5 323 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 DAPK2Q9UIK4 370 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 FBXL3Q9UKT7 428 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 SLC22A13Q9Y226 551 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 RASD1Q9Y272 281 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 ZNF281Q9Y2X9 895 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 CSAG2Q9Y5P2 127 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 DCHS1Q96JQ0 3298 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 FREM1Q5H8C1 2179 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 GJE1A6NN92 205 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 CENPBD1B2RD01 187 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 LOC110117498-PIK3R3F6TDL0 507 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 PHYHO14832 338 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 SMAD9O15198 467 aaKnown RBP9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 EIF1BO60739 113 aaKnown RBP9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 FZD7O75084 574 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 PNPP00491 289 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 SERPINA3P01011 423 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 SLC2A2P11168 524 aaPredicted RBP9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 MTNR1BP49286 362 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 CLDN15P56746 228 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 ARG2P78540 354 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 SLC17A1Q14916 467 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 SLC25A35Q3KQZ1 300 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 CCDC92Q53HC0 331 aaPredicted RBP9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 THEM4Q5T1C6 240 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 CREB3L2Q70SY1 520 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 ZNF679Q8IYX0 411 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR9K2Q8NGE7 335 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR51A4Q8NGJ6 313 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR6N1Q8NGY5 312 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR10D3Q8NH80 312 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 KCNE4Q8WWG9 221 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 AP3S1Q92572 193 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 DIRAS2Q96HU8 199 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 ZNF845Q96IR2 970 aaPredicted RBP9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 SLC6A15Q9H2J7 730 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 ZNF703Q9H7S9 590 aaPredicted RBP9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 MALT1Q9UDY8 824 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 POLR1DQ9Y2S0 133 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 LRP12Q9Y561 859 aa9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 TNRC6AQ8NDV7 1962 aaKnown RBP9.49□□□□□ -0.89
SMPD4P1-201ENST00000416717 OR5H15A6NDH6 313 aa9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 TAF4O00268 1085 aa9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 ITGB2P05107 769 aa9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 SP1P08047 785 aa9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 LAP3P28838 519 aa9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 SELENOPP49908 381 aa9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 MEOX1P50221 254 aa9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 ZNF45Q02386 682 aa9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 MFGE8Q08431 387 aaPredicted RBP9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 ZNF239Q16600 458 aaKnown RBP9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 WDR38Q5JTN6 314 aa9.48□□□□□ -0.89
SMPD4P1-201ENST00000416717 PHYHD1Q5SRE7 291 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms