RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ADAMTS16Q8TE57 1224 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 FAM222BQ8WU58 562 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 TMEM255BQ8WV15 326 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 DNAJA4Q8WW22 397 aaPredicted RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 AKAP1Q92667 903 aaKnown RBP eCLIP4.28□□□□□ -1.72
VPS41-205ENST00000414632 SLC38A4Q969I6 547 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SLC35B4Q969S0 331 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 APH1AQ96BI3 265 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 S100PBPQ96BU1 408 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 C14orf79Q96F83 325 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 PIK3IP1Q96FE7 263 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SLC47A1Q96FL8 570 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SLC41A3Q96GZ6 507 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 ZNF385AQ96PM9 386 aaKnown RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 HOPXQ9BPY8 73 aaPredicted RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 PRSS27Q9BQR3 290 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 HDHD5Q9BXW7 423 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 POLDIP3Q9BY77 421 aaKnown RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 POTEKPQ9BYX7 375 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 ACTR6Q9GZN1 396 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 GLRX2Q9NS18 164 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SERTAD4Q9NUC0 356 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 EMC3Q9P0I2 261 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 NDRG3Q9UGV2 375 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 ST6GALNAC2Q9UJ37 374 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 ADAM21Q9UKJ8 722 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SLC7A7Q9UM01 511 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 TRAPPC4Q9Y296 219 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SLC9A8Q9Y2E8 581 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 TESMINQ9Y4I5 508 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 FLVCR1Q9Y5Y0 555 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 LYVE1Q9Y5Y7 322 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 AKAP6Q13023 2319 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 TEP1Q99973 2627 aaKnown RBP4.27□□□□□ -1.73
VPS41-205ENST00000414632 HEATR1Q9H583 2144 aaKnown RBP4.27□□□□□ -1.73
VPS41-205ENST00000414632 TRAV36DV7A0A075B6V5 113 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 IGKV3D-15A0A087WSY6 115 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 A0A087WUJ7 227 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 TRAPPC13A5PLN9 417 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 ENO4A6NNW6 628 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 DEFB108AA8MXU0 73 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 PTGES3LE9PB15 166 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 hCG_2039718K7EN88 272 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 NDUFAB1O14561 156 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 CASKO14936 926 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 CHP2O43745 196 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 EIF1BO60739 113 aaKnown RBP4.27□□□□□ -1.73
VPS41-205ENST00000414632 UPK3AO75631 287 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 CTAG2O75638 210 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 SEC14L2O76054 403 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 PDE5AO76074 875 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 DIRAS1O95057 198 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 FAM107AO95990 144 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 CH25HO95992 272 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 PLAUP00749 431 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 UMPSP11172 480 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 GGT1P19440 569 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 FUT1P19526 365 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 AHCYP23526 432 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 FKBP2P26885 142 aaKnown RBP4.27□□□□□ -1.73
VPS41-205ENST00000414632 UGT2B15P54855 530 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 TUBA1BP68363 451 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 TUBA4AP68366 448 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 CFHR3Q02985 330 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 POU3F1Q03052 451 aaPredicted RBP4.27□□□□□ -1.73
VPS41-205ENST00000414632 C1DQ13901 141 aaKnown RBP4.27□□□□□ -1.73
VPS41-205ENST00000414632 SLC17A1Q14916 467 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 TAB1Q15750 504 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 TSPO2Q5TGU0 170 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 CARD17Q5XLA6 110 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 FBXW9Q5XUX1 488 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 GLYATQ6IB77 296 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 NIPAL3Q6P499 406 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 ZNF613Q6PF04 617 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 TTC33Q6PID6 262 aaPredicted RBP4.27□□□□□ -1.73
VPS41-205ENST00000414632 C6orf89Q6UWU4 347 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 LCNL1Q6ZST4 164 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 CREB3L2Q70SY1 520 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 TUBA1AQ71U36 451 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 LINGO2Q7L985 606 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 BHLHA15Q7RTS1 189 aaPredicted RBP4.27□□□□□ -1.73
VPS41-205ENST00000414632 AAED1Q7RTV5 226 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 CDC20BQ86Y33 519 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 EPHX4Q8IUS5 362 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 FAM86B1Q8N7N1 296 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 OR52N5Q8NH56 324 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 MFSD8Q8NHS3 518 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 BCAS4Q8TDM0 211 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 C2CD4CQ8TF44 421 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 RASSF5Q8WWW0 418 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 NEUROG1Q92886 237 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 NSL1Q96IY1 281 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 TXNDC15Q96J42 360 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 ALKBH3Q96Q83 286 aaPredicted RBP4.27□□□□□ -1.73
VPS41-205ENST00000414632 CDRT15Q96T59 188 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 THAP7Q9BT49 309 aaPredicted RBP4.27□□□□□ -1.73
VPS41-205ENST00000414632 EMC6Q9BV81 110 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 C1QTNF6Q9BXI9 259 aa4.27□□□□□ -1.73
VPS41-205ENST00000414632 MUC13Q9H3R2 512 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms