RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ZYG11BQ9C0D3 744 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 CLSTN2Q9H4D0 955 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 C8orf33Q9H7E9 229 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 CYP3A43Q9HB55 503 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 MTCH1Q9NZJ7 389 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 ST3GAL6Q9Y274 331 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 RHBDD3Q9Y3P4 386 aa3.3□□□□□ -1.88
HMGB3P31-201ENST00000413333 GTF3C1Q12789 2109 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 TP53BP1Q12888 1972 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 NFASCO94856 1347 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 A6NDX4 124 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 LYRM9A8MSI8 78 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 SMKR1H3BMG3 65 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 SLC9A3R1O14745 358 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 NUPL2O15504 423 aaKnown RBP3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 SUPT3HO75486 399 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 FCN3O75636 299 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 SRP72O76094 671 aaKnown RBP3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 IFNW1P05000 195 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 CLTAP09496 248 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 MAS1LP35410 378 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 RAB11AP62491 216 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 MXD1Q05195 221 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 RAD51Q06609 339 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 RAB11BQ15907 218 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 SPECC1LQ69YQ0 1117 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 COX15Q7KZN9 410 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 TMEM150AQ86TG1 271 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 Q8N9W7 124 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 OR6X1Q8NH79 312 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 OR5K2Q8NHB8 316 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 TMEM158Q8WZ71 300 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 NRTNQ99748 197 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 PIGUQ9H490 435 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 FANCEQ9HB96 536 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 TMEM9BQ9NQ34 198 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 ZNF226Q9NYT6 803 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 ADAM22Q9P0K1 906 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 STOX2Q9P2F5 926 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 ZNF629Q9UEG4 869 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 TP53TG5Q9Y2B4 290 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 CACNG2Q9Y698 323 aa3.29□□□□□ -1.88
HMGB3P31-201ENST00000413333 CENPJQ9HC77 1338 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 TDRD6O60522 2096 aaKnown RBP3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 TRAV39A0A0B4J263 110 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 ICOSLGO75144 302 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 FABP3P05413 133 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 SERPINE2P07093 398 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 SMIM10L1P0DMW3 83 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 RCC1P18754 421 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 ELK1P19419 428 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 GPX4P36969 197 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 RND2P52198 227 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 MAB21L1Q13394 359 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 GGTLC2Q14390 218 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 PON3Q15166 354 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 TTLL9Q3SXZ7 439 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 ANKRD22Q5VYY1 191 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 STUMQ69YW2 141 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 C12orf54Q6X4T0 127 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 ZNF493Q6ZR52 646 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 H2AFVQ71UI9 128 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 STRADAQ7RTN6 431 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 OR2A1Q8NGT9 310 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 ACTRT1Q8TDG2 376 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 ZNF707Q96C28 371 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 SMIM10Q96HG1 83 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 SLC35E1Q96K37 410 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 JSRP1Q96MG2 331 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 TSSK3Q96PN8 268 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 MRPL37Q9BZE1 423 aaKnown RBP3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 RGCCQ9H4X1 137 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 ABCB10Q9NRK6 738 aa3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 PEF1Q9UBV8 284 aaKnown RBP3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 CHTOPQ9Y3Y2 248 aaKnown RBP3.28□□□□□ -1.88
HMGB3P31-201ENST00000413333 ADAMTS9Q9P2N4 1935 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 SYNRGQ9UMZ2 1314 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 TMEM120BA0PK00 339 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 LAD1O00515 517 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 SCAMP2O15127 329 aaKnown RBP3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 SIVA1O15304 175 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 ZNF861PO60384 105 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 LSM8O95777 96 aaKnown RBP3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 HLA-HP01893 362 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 BGLAPP02818 100 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 ARG1P05089 322 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 GNAO1P09471 354 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 ZNF17P17021 662 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 GGT1P19440 569 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 CCNE1P24864 410 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 NMUP48645 174 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 CSNK1DP48730 415 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 WNT4P56705 351 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 SLC7A9P82251 487 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 TCP10Q12799 353 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 OR7A5Q15622 319 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 TMEM183BQ1AE95 376 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 PGGHGQ32M88 737 aa3.27□□□□□ -1.89
HMGB3P31-201ENST00000413333 PIGGQ5H8A4 983 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms