RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 MPIP34949 423 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 CCT3P49368 545 aaKnown RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 GSK3BP49841 420 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 EMDP50402 254 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 PPP5CP53041 499 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 PAX9P55771 341 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 OR4D2P58180 307 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 CSNK2BP67870 215 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 MS4A2Q01362 244 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 LIPEQ05469 1076 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 DMTNQ08495 405 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 FUT5Q11128 374 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 FADDQ13158 208 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 SERTAD2Q14140 314 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 MAPK11Q15759 364 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 TRMT12Q53H54 448 aaKnown RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 LCN8Q6JVE9 175 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 TMEM107Q6UX40 140 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 ZNF621Q6ZSS3 439 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 BTN2A1Q7KYR7 527 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 C6orf120Q7Z4R8 191 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 RNF130Q86XS8 419 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 MARCH9Q86YJ5 346 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 HPS6Q86YV9 775 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 OR8H2Q8N162 312 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 TRIML2Q8N7C3 387 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 ZNF615Q8N8J6 731 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 NFAM1Q8NET5 270 aaPredicted RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 OR7G1Q8NGA0 311 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 OR52E4Q8NGH9 312 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 OR10A6Q8NH74 314 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 OR5AK3PQ8NH89 298 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 ZNF721Q8TF20 911 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 CT55Q8WUE5 264 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 MR1Q95460 341 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 SPSB1Q96BD6 273 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 PPWD1Q96BP3 646 aaKnown RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 ASB9Q96DX5 294 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 VSTM2LQ96N03 204 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 ZNF578Q96N58 590 aaPredicted RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 MS4A4EQ96PG1 132 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 RAB3IPQ96QF0 476 aaPredicted RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 SH3GL1Q99961 368 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 PELOQ9BRX2 385 aaKnown RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 TRIM15Q9C019 465 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 SLC7A5P2Q9GIP4 190 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 ANKRA2Q9H9E1 313 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 DNAJC4Q9NNZ3 241 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 ADAP2Q9NPF8 381 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 GIN1Q9NXP7 522 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 NXT1Q9UKK6 140 aaKnown RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 POMPQ9Y244 141 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 AP3M1Q9Y2T2 418 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 ACACAQ13085 2346 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 APC2O95996 2303 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 TCRBV3S1A0A5B6 114 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 SAGE2PA6NJ88 616 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 EVPLLA8MZ36 301 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 C17orf105B2RV13 164 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 IDSB3KWA1 339 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 C21orf140B9A014 251 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 C9J4A7 227 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 HMGN4O00479 90 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 RAD1O60671 282 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 NME6O75414 186 aaPredicted RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 GCM2O75603 506 aaPredicted RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 BCAS2O75934 225 aaPredicted RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 HMGN2P05204 90 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 GUSBP08236 651 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 TFPTP0C1Z6 253 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 COX6A1P12074 109 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 ATP6V1B2P21281 511 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 F8A1P23610 371 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 SOAT1P35610 550 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 CHI3L1P36222 383 aaPredicted RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 CRYBA2P53672 197 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 RAD23AP54725 363 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 EMP2P54851 167 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 DSTNP60981 165 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 ACTR3P61158 418 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 DLK1P80370 383 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 CYCSP99999 105 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 RBBP4Q09028 425 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 STX4Q12846 297 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 TRAP1Q12931 704 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 BNIP2Q12982 314 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 SRSF9Q13242 221 aaKnown RBP eCLIP3.59□□□□□ -1.83
CLK1-203ENST00000409769 LASP1Q14847 261 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 EXOSC7Q15024 291 aaKnown RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 NSDHLQ15738 373 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 ZNF74Q16587 644 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.59□□□□□ -1.83
CLK1-203ENST00000409769 MLIPQ5VWP3 458 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 AP1ARQ63HQ0 302 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 TNFAIP8L2Q6P589 184 aaPredicted RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 ERICH5Q6P6B1 374 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 FAM199XQ6PEV8 388 aaPredicted RBP3.59□□□□□ -1.83
CLK1-203ENST00000409769 ZCCHC12Q6PEW1 402 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 Q6ZRP5 223 aa3.59□□□□□ -1.83
CLK1-203ENST00000409769 LANCL3Q6ZV70 420 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms