RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 DHRS9Q9BPW9 319 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 RERGLQ9H628 205 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 ATP23Q9Y6H3 246 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 ARID1AO14497 2285 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 OR6C68A6NDL8 312 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 TMCC2O75069 709 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 CALCRP30988 508 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 PCBD1P61457 104 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 RAB39AQ14964 217 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 DEFB113Q30KQ7 82 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 HIPK1Q86Z02 1210 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 ZNF584Q8IVC4 421 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 C10orf67Q8IYJ2 551 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 OR6V1Q8N148 313 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 NPEPL1Q8NDH3 523 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 OR4F15Q8NGB8 312 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 PYDC1Q8WXC3 89 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 DNAJC9Q8WXX5 260 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 LRTOMTQ8WZ04 291 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 FBXO17Q96EF6 278 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 TSSK2Q96PF2 358 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 CCNB1IP1Q9NPC3 277 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 BEX4Q9NWD9 120 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 LAMP3Q9UQV4 416 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 COA3Q9Y2R0 106 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 USF3Q68DE3 2245 aa17.21■□□□□ 0.35
PDLIM2-207ENST00000409417 RTTNQ86VV8 2226 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 H3BN98 237 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 DCTN6O00399 190 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 SCG5P05408 212 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 SOD3P08294 240 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 PLP2Q04941 152 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 ZNF362Q5T0B9 420 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 ZNF544Q6NX49 715 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 ZFP1Q6P2D0 407 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 FAHD1Q6P587 224 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 AMIGO2Q86SJ2 522 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 SDR9C7Q8NEX9 313 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 OR4Q3Q8NH05 313 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 CENPNQ96H22 339 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 DDOQ99489 341 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 FOXC2Q99958 501 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 WACQ9BTA9 647 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 ZNF416Q9BWM5 594 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 RACGAP1Q9H0H5 632 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 RPRD1BQ9NQG5 326 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 ITGB1BP2Q9UKP3 347 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 B9D1Q9UPM9 204 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 TIMM10BQ9Y5J6 103 aa17.2■□□□□ 0.34
PDLIM2-207ENST00000409417 IGLV1-36A0A0B4J1U3 117 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 C12orf71A8MTZ7 269 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 G3V2T6 193 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 PTHP01270 115 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 ZNF35P13682 527 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 OSMP13725 252 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 ZNF32P17041 273 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 TTKP33981 857 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 HGFACQ04756 655 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 ENDOGQ14249 297 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 SYT9Q86SS6 491 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 DTX2Q86UW9 622 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 ZBTB46Q86UZ6 589 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 ZDHHC13Q8IUH4 622 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 NUP37Q8NFH4 326 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 TMEM171Q8WVE6 324 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 FOXN4Q96NZ1 517 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 GRIP2Q9C0E4 1043 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 C1orf198Q9H425 327 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 SRA1Q9HD15 236 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 EMC7Q9NPA0 242 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 KIF17Q9P2E2 1029 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 FKBP7Q9Y680 259 aa17.19■□□□□ 0.34
PDLIM2-207ENST00000409417 IQCMA0A1B0GVH7 501 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 POU1F1P28069 291 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 FABP6P51161 128 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 ART1P52961 327 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 HSF2Q03933 536 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 GLO1Q04760 184 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 PABPC1L2AQ5JQF8 200 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 AGAP6Q5VW22 663 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 SLC27A4Q6P1M0 643 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 UGT2A3Q6UWM9 527 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 SVOPLQ8N434 492 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 SLC30A7Q8NEW0 376 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 OR2H1Q9GZK4 316 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 CXorf56Q9H5V9 222 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 PAPOLBQ9NRJ5 636 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 CA10Q9NS85 328 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 KLHL21Q9UJP4 597 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 H3BNX3 289 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 IFNGP01579 166 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 CD8AP01732 235 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 ZNF23P17027 643 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 APOBEC3AP31941 199 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 DAPP51397 102 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 LSM6P62312 80 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 PSG4Q00888 419 aa17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 GABPB1Q06547 395 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-207ENST00000409417 KCNMB1Q16558 191 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms