RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ANKRD53Q8N9V6 530 aa4.56□□□□□ -1.68
SCN3A-203ENST00000409101 OR6T1Q8NGN1 323 aa4.56□□□□□ -1.68
SCN3A-203ENST00000409101 OR6F1Q8NGZ6 308 aa4.56□□□□□ -1.68
SCN3A-203ENST00000409101 FOXB1Q99853 325 aa4.56□□□□□ -1.68
SCN3A-203ENST00000409101 SULT4A1Q9BR01 284 aa4.56□□□□□ -1.68
SCN3A-203ENST00000409101 SHARPINQ9H0F6 387 aa4.56□□□□□ -1.68
SCN3A-203ENST00000409101 WDR54Q9H977 334 aa4.56□□□□□ -1.68
SCN3A-203ENST00000409101 LIN7BQ9HAP6 207 aa4.56□□□□□ -1.68
SCN3A-203ENST00000409101 IGHV3-64DA0A0J9YX35 117 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 MEIS3P1A6NDR6 274 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 H3BSA7 217 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 M0R135 149 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 GPRIN2O60269 458 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 TSPAN9O75954 239 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 IFNA4P05014 189 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 MYF6P23409 242 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SDHAP31040 664 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 GIPRP48546 466 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 DIO1P49895 249 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 RBP2P50120 134 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 PPP5CP53041 499 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CAV3P56539 151 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 MRPS10P82664 201 aaKnown RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SNTB2Q13425 540 aaKnown RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CEACAM16Q2WEN9 425 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SMIM21Q3B7S5 101 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SFRP4Q6FHJ7 346 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 LPCAT3Q6P1A2 487 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 HAGHLQ6PII5 290 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 Q6ZTK2 550 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 LSRQ86X29 649 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 GABRG1Q8N1C3 465 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 OR10D3Q8NH80 312 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 RAB1CQ92928 201 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ANKRD9Q96BM1 317 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SDSLQ96GA7 329 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ZNF799Q96GE5 643 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 GNRHR2Q96P88 292 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 PRR14Q9BWN1 585 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 AMBRA1Q9C0C7 1298 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 PLK3Q9H4B4 646 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CNOT2Q9NZN8 540 aaKnown RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SLAMF8Q9P0V8 285 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 NUDT19A8MXV4 375 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SHISA8B8ZZ34 492 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 INMT-MINDY4F8WBC2 141 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 I6L893 689 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 HSD17B6O14756 317 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 DHHO43323 396 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 GPR137BO60478 399 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CREBL2O60519 120 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 UBBP0CG47 229 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CT45A6P0DMU7 189 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CT45A5P0DMU8 189 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CT45A7P0DMV0 189 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CT45A8P0DMV1 189 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CT45A9P0DMV2 189 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 LIFP15018 202 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 BLVRBP30043 206 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ZFP36L2P47974 494 aaKnown RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 PPP1CAP62136 330 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 FZD5Q13467 585 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CT45A2Q5DJT8 189 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CT45A1Q5HYN5 189 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 AKR1C8PQ5T2L2 129 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 AGAP6Q5VW22 663 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CYP4V2Q6ZWL3 525 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 RDH10Q8IZV5 341 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CT45A3Q8NHU0 189 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 FNDC9Q8TBE3 224 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 EXTL1Q92935 676 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ISL2Q96A47 359 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 MRPS24Q96EL2 167 aaKnown RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 PIK3IP1Q96FE7 263 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ASH2LQ9UBL3 628 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SSUH2Q9Y2M2 353 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 AKAP11Q9UKA4 1901 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ALG1L2C9J202 215 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 BHLHE40O14503 412 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CTSVO60911 334 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 S100A9P06702 114 aaKnown RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CEACAM1P13688 526 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ACHEP22303 614 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ZNF93P35789 620 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 RAB11AP62491 216 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CDK5R2Q13319 367 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 MAB21L1Q13394 359 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SHBQ15464 509 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ZNF385BQ569K4 471 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SPATA46Q5T0L3 261 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 NOXA1Q86UR1 476 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SPARTQ8N0X7 666 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 MARVELD2Q8N4S9 558 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 TEX29Q8N6K0 151 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 CD300LFQ8TDQ1 290 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ZNF431Q8TF32 576 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 APOBEC3DQ96AK3 386 aaPredicted RBP4.55□□□□□ -1.68
SCN3A-203ENST00000409101 SGK3Q96BR1 496 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 ABHD6Q9BV23 337 aa4.55□□□□□ -1.68
SCN3A-203ENST00000409101 TXNIPQ9H3M7 391 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms