RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 MAGEB1P43366 347 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 KLF3P57682 345 aaPredicted RBP16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 LCN6P62502 163 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 PSG4Q00888 419 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 ZNF101Q8IZC7 436 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 RNF148Q8N7C7 305 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 SLC7A13Q8TCU3 470 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 YIPF5Q969M3 257 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 POM121L2Q96KW2 1035 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 LOC100509620A0A075B734 347 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 NDUFAB1O14561 156 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 WNT5AP41221 380 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 SLC9A3P48764 834 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 CCNIQ14094 377 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 ANKDD1AQ495B1 522 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 FAM205BPQ63HN1 556 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 TMPRSS11FQ6ZWK6 438 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 FAM86B1Q8N7N1 296 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 C11orf40Q8WZ69 217 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 RDH5Q92781 318 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 BCL2L14Q9BZR8 327 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 SPAG4Q9NPE6 437 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 NDUFAF4Q9P032 175 aa16.49■□□□□ 0.23
SMARCB1-204ENST00000407422 A0A1W2PPL8 197 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 C5orf49A4QMS7 147 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 GMNCA6NCL1 334 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 A6NIZ1 184 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 ATP8B1O43520 1251 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 SCG5P05408 212 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 DRD4P21917 467 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 RPL4P36578 427 aaKnown RBP16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 SELENOVP59797 346 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 RAP1BP61224 184 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 RAP1AP62834 184 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 ZBED5Q49AG3 693 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 GLYATQ6IB77 296 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 CYP4Z1Q86W10 505 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 FAM156AQ8NDB6 213 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 OR1J1Q8NGS3 322 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 GTF3AQ92664 365 aaKnown RBP16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 HPS1Q92902 700 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 FAM46AQ96IP4 442 aaKnown RBP16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 OR2H1Q9GZK4 316 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 WNT5BQ9H1J7 359 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 NARFLQ9H6Q4 476 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 HINT3Q9NQE9 182 aaKnown RBP16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 ADA2Q9NZK5 511 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 RPS6KA6Q9UK32 745 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 RNF212BA8MTL3 300 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 C17orf100A8MU93 164 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 SNX3O60493 162 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 DIRAS1O95057 198 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 CST2P09228 141 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 ACHEP22303 614 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 CCL8P80075 99 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 GLO1Q04760 184 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 TMEM255AQ5JRV8 349 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 SPATA46Q5T0L3 261 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 FOXL2NBQ6ZUU3 175 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 RRM2BQ7LG56 351 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 FNDC8Q8TC99 324 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 C7orf34Q96L11 122 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 Q96M85 177 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 ANKRD19PQ9H560 264 aa16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 ZNF275Q9NSD4 429 aaPredicted RBP16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 DCAF13Q9NV06 445 aaKnown RBP16.48■□□□□ 0.23
SMARCB1-204ENST00000407422 A0A1W2PRQ8 180 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 WNT9BO14905 357 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 PHF1O43189 567 aaPredicted RBP16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 H1F0P07305 194 aaKnown RBP16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 CD14P08571 375 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 SRD5A1P18405 259 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 PRDX6P30041 224 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 GPR6P46095 362 aaPredicted RBP16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 GDI2P50395 445 aaKnown RBP16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 DGCR6Q14129 220 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 ENDOGQ14249 297 aaKnown RBP16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 MESTQ5EB52 335 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 ZNF774Q6NX45 483 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 UGT2A3Q6UWM9 527 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 FAM122BQ7Z309 247 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 LINC01356Q8N9X3 169 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 SPATA3Q8NHX4 192 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 ZNF416Q9BWM5 594 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 SLCO1C1Q9NYB5 712 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 GRHPRQ9UBQ7 328 aa16.47■□□□□ 0.23
SMARCB1-204ENST00000407422 TRBV4-1A0A0J9YWV2 114 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 CDC14BO60729 498 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 RP2O75695 350 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 LIMS1P48059 325 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 CDH15P55291 814 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 SEC23BQ15437 767 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 CR1LQ2VPA4 569 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 FGD3Q5JSP0 725 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 TMEM154Q6P9G4 183 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 EMC7Q9NPA0 242 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 GPR160Q9UJ42 338 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 FAM32AQ9Y421 112 aaKnown RBP16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 TIMM10BQ9Y5J6 103 aa16.46■□□□□ 0.23
SMARCB1-204ENST00000407422 V9GYQ6 96 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms