RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 THAP7Q9BT49 309 aaPredicted RBP11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 WACQ9BTA9 647 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 TXNIPQ9H3M7 391 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 MARCH7Q9H992 704 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 TCF7L1Q9HCS4 588 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF275Q9NSD4 429 aaPredicted RBP11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 SACM1LQ9NTJ5 587 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 DDX28Q9NUL7 540 aaKnown RBP11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF346Q9UL40 294 aaKnown RBP11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 PPIEQ9UNP9 301 aaKnown RBP11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 OSGIN2Q9Y236 505 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 TMED7Q9Y3B3 224 aa11.58□□□□□ -0.56
SMARCB1-203ENST00000407082 TMEM212A6NML5 194 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 FAM47E-STBD1D6RA91 191 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 LRRN3E7EW58 273 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 OIP5O43482 229 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 SUSD5O60279 629 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 SELENOFO60613 162 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 ZG16O60844 167 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 CEACAM4O75871 244 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 ECDO95905 644 aaPredicted RBP11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 CALCBP10092 127 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 EPXP11678 715 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 PSKH1P11801 424 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 ICAM2P13598 275 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 AHCYP23526 432 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 FKBP2P26885 142 aaKnown RBP11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 THBS2P35442 1172 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 MMP15P51511 669 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 CLDN20P56880 219 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 AP3S2P59780 193 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 EGR4Q05215 589 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 ZP4Q12836 540 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 AIMP2Q13155 320 aaKnown RBP11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 BTBD16Q32M84 506 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 Q499Y3 187 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 ZFP69Q49AA0 526 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 C1orf140Q5VVS0 124 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 KCTD18Q6PI47 426 aaPredicted RBP11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 SPATC1Q76KD6 591 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 SSX6Q7RTT6 188 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 PRR22Q8IZ63 422 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF454Q8N9F8 522 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 OR4M1Q8NGD0 313 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 OR51L1Q8NGJ5 315 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 OR6F1Q8NGZ6 308 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 OR5AK2Q8NH90 309 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF417Q8TAU3 575 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 GPR119Q8TDV5 335 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 RAB40AQ8WXH6 277 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 KTI12Q96EK9 354 aaPredicted RBP11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 IMMP1LQ96LU5 166 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 MOGAT1Q96PD6 335 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 LMF1Q96S06 567 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 NEK6Q9HC98 313 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 SRA1Q9HD15 236 aaKnown RBP11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 BRD7Q9NPI1 651 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 ING3Q9NXR8 418 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 MRPL39Q9NYK5 338 aaKnown RBP11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 ETV7Q9Y603 341 aa11.57□□□□□ -0.56
SMARCB1-203ENST00000407082 A0A0G2JK05 382 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 NPIPB13A6NJU9 1138 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 NPIPB4C9JG80 1138 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 ARHGEF9O43307 516 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 GSTZ1O43708 216 aaPredicted RBP11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 F13BP05160 661 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 GSTT2BP0CG30 244 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 KIR2DL3P43628 341 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 DLX5P56178 289 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 LTBQ06643 244 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 RIPPLY1Q0D2K3 151 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 INSL4Q14641 139 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 P2RY14Q15391 338 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 KCNJ8Q15842 424 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 EXT1Q16394 746 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF684Q5T5D7 378 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 SLC22A10Q63ZE4 541 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 FDX2Q6P4F2 183 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 RPTNQ6XPR3 784 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 NCCRP1Q6ZVX7 275 aaPredicted RBP11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 TIGD4Q8IY51 512 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 CCDC168Q8NDH2 2452 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 NFAM1Q8NET5 270 aaPredicted RBP11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 M1APQ8TC57 530 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 SLC22A8Q8TCC7 542 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 ITFG2Q969R8 447 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 DDIT4LQ96D03 193 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 TSPAN32Q96QS1 320 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 MARVELD1Q9BSK0 173 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 TRAF4Q9BUZ4 470 aaPredicted RBP11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 ACTR6Q9GZN1 396 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 DPAGT1Q9H3H5 408 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 MALT1Q9UDY8 824 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 V9GY05 133 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 HIVEP1P15822 2718 aa11.56□□□□□ -0.56
SMARCB1-203ENST00000407082 PCSK5Q92824 1860 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 A0A0G2JMP0 313 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 A0A0X1KG70 313 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 FAM172BPA6NC97 362 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 NAP1L6A6NFF2 107 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms