RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 NMNAT3Q96T66 252 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 FOXB1Q99853 325 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 GABARAPL3Q9BY60 117 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 SYT4Q9H2B2 425 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 SEC61A2Q9H9S3 476 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 RNPEPL1Q9HAU8 725 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 SLC25A19Q9HC21 320 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 CMC2Q9NRP2 79 aa9.24□□□□□ -0.93
RPAIN-204ENST00000405578 TMEFF2Q9UIK5 374 aaPredicted RBP9.24□□□□□ -0.93
RPAIN-204ENST00000405578 RRP15Q9Y3B9 282 aaKnown RBP9.24□□□□□ -0.93
RPAIN-204ENST00000405578 A0A096LPE4 126 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 A0A1W2PPL8 197 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 A0A1W2PPZ6 126 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 MITFO75030 526 aaPredicted RBP9.23□□□□□ -0.93
RPAIN-204ENST00000405578 SLC2A10O95528 541 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 EPXP11678 715 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 CDKN2AP42771 156 aaKnown RBP9.23□□□□□ -0.93
RPAIN-204ENST00000405578 BLVRAP53004 296 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 CDC42P60953 191 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 CDK5Q00535 292 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 GLO1Q04760 184 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 FMODQ06828 376 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 RIPK1Q13546 671 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 DAZAP2Q15038 168 aaPredicted RBP9.23□□□□□ -0.93
RPAIN-204ENST00000405578 PPA1Q15181 289 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 TSC22D1Q15714 1073 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 SGCAQ16586 387 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 LRRC36Q1X8D7 754 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 TBRG1Q3YBR2 411 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 PHYHD1Q5SRE7 291 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 ALKBH2Q6NS38 261 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 SLC25A47Q6Q0C1 308 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 PTCHD4Q6ZW05 846 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF627Q7L945 461 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 LINGO2Q7L985 606 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 GLB1L2Q8IW92 636 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 SLC22A24Q8N4F4 322 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 PROKR2Q8NFJ6 384 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 OR4Q3Q8NH05 313 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 OTULINQ96BN8 352 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 NMD3Q96D46 503 aaKnown RBP9.23□□□□□ -0.93
RPAIN-204ENST00000405578 BOD1Q96IK1 185 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 WFIKKN1Q96NZ8 548 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 NUAK2Q9H093 628 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 SIAEQ9HAT2 523 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 SRA1Q9HD15 236 aaKnown RBP9.23□□□□□ -0.93
RPAIN-204ENST00000405578 RPRD1BQ9NQG5 326 aaKnown RBP9.23□□□□□ -0.93
RPAIN-204ENST00000405578 SLC17A5Q9NRA2 495 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 TMEM38BQ9NVV0 291 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 IMPAD1Q9NX62 359 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 TVP23BQ9NYZ1 205 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 FKBP7Q9Y680 259 aa9.23□□□□□ -0.93
RPAIN-204ENST00000405578 ANK3Q12955 4377 aaKnown RBP9.23□□□□□ -0.93
RPAIN-204ENST00000405578 ARPC4-TTLL3A0A0A6YYG9 625 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 ZAR1LA6NP61 321 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 PRR23D1E9PI22 279 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-204ENST00000405578 CASQ2O14958 399 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-204ENST00000405578 SURF4O15260 269 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 UBL3O95164 117 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 GOSR1O95249 250 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 HLA-DQA2P01906 255 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 PRR23D2P0DMB1 279 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-204ENST00000405578 B4GALT1P15291 398 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 CTLA4P16410 223 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 LAP3P28838 519 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 CCKARP32238 428 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 SLC25A1P53007 311 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 PCBD1P61457 104 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 MRPS34P82930 218 aaKnown RBP9.22□□□□□ -0.93
RPAIN-204ENST00000405578 CRMP1Q14194 572 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 TAB1Q15750 504 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 SLC36A2Q495M3 483 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 HIKESHIQ53FT3 197 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 SLX4IPQ5VYV7 408 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 TMEM236Q5W0B7 351 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 ACSM5Q6NUN0 579 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 TMEM53Q6P2H8 277 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 SLC16A14Q7RTX9 510 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 WFDC8Q8IUA0 241 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 WDFY1Q8IWB7 410 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 DEPDC4Q8N2C3 294 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 GALNT4Q8N4A0 578 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 CYB561A3Q8NBI2 242 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 SLC37A3Q8NCC5 494 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 NPEPL1Q8NDH3 523 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF555Q8NEP9 628 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 OR10H5Q8NGA6 315 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 OR52N5Q8NH56 324 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 LINC01560Q8TB33 94 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 BCL2L2Q92843 193 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-204ENST00000405578 ZNF837Q96EG3 531 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-204ENST00000405578 ZC3HAV1LQ96H79 300 aaKnown RBP9.22□□□□□ -0.93
RPAIN-204ENST00000405578 WACQ9BTA9 647 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 RACGAP1Q9H0H5 632 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 NELFAQ9H3P2 528 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 OCEL1Q9H607 264 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 SMPD3Q9NY59 655 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-204ENST00000405578 H2AFY2Q9P0M6 372 aaPredicted RBP9.22□□□□□ -0.93
RPAIN-204ENST00000405578 FBXL3Q9UKT7 428 aa9.22□□□□□ -0.93
RPAIN-204ENST00000405578 B9D1Q9UPM9 204 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms