RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 DSCR9P59020 149 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 ERVS71-1P61550 626 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 MRPS34P82930 218 aaKnown RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 PPP2R2BQ00005 443 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 GALK2Q01415 458 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 DBPQ10586 325 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 GGTLC2Q14390 218 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 EFNB3Q15768 340 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 FXNQ16595 210 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 ALKBH6Q3KRA9 238 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC36A2Q495M3 483 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 IQCCQ4KMZ1 466 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 MESTQ5EB52 335 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 PABPC1L2AQ5JQF8 200 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 C10orf128Q5T292 105 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 GKAP1Q5VSY0 366 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 TMEM53Q6P2H8 277 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC25A47Q6Q0C1 308 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 TMPRSS11FQ6ZWK6 438 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 RRM2BQ7LG56 351 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 HDDC2Q7Z4H3 204 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 RNF113BQ8IZP6 322 aaKnown RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 PGAM4Q8N0Y7 254 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 FITM2Q8N6M3 262 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 ICA1LQ8NDH6 482 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 CPEB3Q8NE35 698 aaKnown RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC30A7Q8NEW0 376 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 IL17RDQ8NFM7 739 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 AKR7LQ8NHP1 331 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF519Q8TB69 540 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 MRPL24Q96A35 216 aaKnown RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 NABP1Q96AH0 204 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 RASD2Q96D21 266 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 PYURFQ96I23 114 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 RSRC1Q96IZ7 334 aaKnown RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 Q96M85 177 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 NSMCE2Q96MF7 247 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 CCT8L2Q96SF2 557 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 GPA33Q99795 319 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 ALG12Q9BV10 488 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 CDH20Q9HBT6 801 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 DYNLRB1Q9NP97 96 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 EMC7Q9NPA0 242 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 YAE1D1Q9NRH1 226 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 CD300AQ9UGN4 299 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 SAMD4AQ9UPU9 718 aaKnown RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 FAM32AQ9Y421 112 aaKnown RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 CMAHPQ9Y471 501 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 FKBP7Q9Y680 259 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 IGHV4-61A0A0C4DH41 118 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 TEX13CA0A0J9YWL9 993 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 IQCMA0A1B0GVH7 501 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 A0A1W2PRQ8 180 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC22A23A1A5C7 686 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 HTR3EA5X5Y0 456 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 UNC119BA6NIH7 251 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 NPIPB13A6NJU9 1138 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 VSTM5A8MXK1 200 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 B2RBV5 119 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 CENPBD1B2RD01 187 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 VWC2LB2RUY7 222 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 NPIPB4C9JG80 1138 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SOCS2O14508 198 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 PTP4A3O75365 173 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 NDUFB2O95178 105 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 CLPTM1O96005 669 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SEMG1P04279 462 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 TP53P04637 393 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 RPLP1P05386 114 aaKnown RBP4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 LCKP06239 509 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 CD14P08571 375 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 DAOP14920 347 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC25A16P16260 332 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF16P17020 682 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 RHCEP18577 417 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 ATP6V1B2P21281 511 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 CCNOP22674 350 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 LAP3P28838 519 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 GLRXP35754 106 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 OMPP47874 163 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 LIMS1P48059 325 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 PPOXP50336 477 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF133P52736 654 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 FXYD6P3P58550 94 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 PSG4Q00888 419 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SPIBQ01892 262 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 HSF2Q03933 536 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 GLO1Q04760 184 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 PLP2Q04941 152 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 DGCR6Q14129 220 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 TAF11Q15544 211 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 TMEM249Q2WGJ8 235 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZBED5Q49AG3 693 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SAMD4BQ5PRF9 694 aaKnown RBP4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SPATA46Q5T0L3 261 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 UGT2A3Q6UWM9 527 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 C16orf89Q6UX73 402 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 CYP2R1Q6VVX0 501 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 RINLQ6ZS11 566 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 FAM122BQ7Z309 247 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms