RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 QDPRP09417 244 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SMIM18P0DKX4 95 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PTNP21246 168 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 UGT2B10P36537 528 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 CFHR2P36980 270 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PRKAG1P54619 331 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 UBE2KP61086 200 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 CSNK2A1P68400 391 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 MRPS11P82912 194 aaKnown RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PGS1Q32NB8 556 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 ANKRD26P1Q6NSI1 321 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PODNL1Q6PEZ8 512 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SMARCD3Q6STE5 483 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SULF2Q8IWU5 870 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 GHDCQ8N2G8 530 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 NUP37Q8NFH4 326 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 NANOS1Q8WY41 292 aaKnown RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 RND1Q92730 232 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 GPA33Q99795 319 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 NAA11Q9BSU3 229 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 GHITMQ9H3K2 345 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 DYNLRB1Q9NP97 96 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 NIT2Q9NQR4 276 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 NKIRAS2Q9NYR9 191 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 POLR3KQ9Y2Y1 108 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 TESMINQ9Y4I5 508 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 COL6A6A6NMZ7 2263 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PCNX2A6NKB5 2137 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SPENQ96T58 3664 aaKnown RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PINLYPA6NC86 204 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 MCIDASD6RGH6 385 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 G3V2T6 193 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 ST8SIA5O15466 376 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PSKH1P11801 424 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PTBP1P26599 531 aaKnown RBP eCLIP3.25□□□□□ -1.891e-9■■■■■ 38.9
FNDC3A-202ENST00000398316 LASP1Q14847 261 aaKnown RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 MAD2L1BPQ15013 274 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 EXOSC7Q15024 291 aaKnown RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SLC25A35Q3KQZ1 300 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 C16orf54Q6UWD8 224 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 MRGPRGQ86SM5 289 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 GPR137CQ8N3F9 429 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 ZSCAN4Q8NAM6 433 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SETD9Q8NE22 299 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 OR8J1Q8NGP2 316 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 ZNF420Q8TAQ5 688 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 DEDD2Q8WXF8 326 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 CNOT9Q92600 299 aaKnown RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 RFT1Q96AA3 541 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 ZNF184Q99676 751 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 HDHD5Q9BXW7 423 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 OCEL1Q9H607 264 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.25□□□□□ -1.899e-7■■■■□ 23.8
FNDC3A-202ENST00000398316 GNG8Q9UK08 70 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SF3B6Q9Y3B4 125 aaKnown RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SVILO95425 2214 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 ZFYVE26Q68DK2 2539 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 DOCK7Q96N67 2140 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 TRBV5-5A0A0J9YX44 114 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SMIM30A4D0T7 59 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 TNFSF13O75888 250 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SEC14L2O76054 403 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 ALDOBP05062 364 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 IGFBP1P08833 259 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 CCL3P10147 92 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 CRISP1P54107 249 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 TRAM1Q15629 374 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PGGHGQ32M88 737 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 ACSF3Q4G176 576 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 THEM4Q5T1C6 240 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 KCTD18Q6PI47 426 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 TBPL2Q6SJ96 375 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 ARL9Q6T311 187 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SATL1Q86VE3 508 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 TPRA1Q86W33 373 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SVOPQ8N4V2 548 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 FAM83FQ8NEG4 500 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 OR4N2Q8NGD1 307 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 OR8D4Q8NGM9 314 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 OR9Q1Q8NGQ5 310 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PTX4Q96A99 478 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 SIGLEC12Q96PQ1 595 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PAPOLGQ9BWT3 736 aaKnown RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PCDHB16Q9NRJ7 776 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 TAS2R10Q9NYW0 307 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 PPP4R1LQ9P1A2 415 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 ZFHX4Q86UP3 3567 aa3.25□□□□□ -1.89
FNDC3A-202ENST00000398316 NPIPA5E9PKD4 350 aa3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 SAP18O00422 153 aaKnown RBP3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 CCL21O00585 134 aa3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 OR2J2O76002 312 aa3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 PPP1R3DO95685 299 aa3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 IGKV3-15P01624 115 aa3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 LCKP06239 509 aa3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 IRF2P14316 349 aa3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 TCN1P20061 433 aaPredicted RBP3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 SERPINB10P48595 397 aa3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 POLR2GP62487 172 aaKnown RBP eCLIP3.24□□□□□ -1.89
FNDC3A-202ENST00000398316 NPRL3Q12980 569 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms