RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 LPCAT4Q643R3 524 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 MUCL1Q96DR8 90 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 BOD1Q96IK1 185 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 TMEM204Q9BSN7 226 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 CMC2Q9NRP2 79 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 AMDHD2Q9Y303 409 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 SLC25A15Q9Y619 301 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 DCTN6O00399 190 aa22.17■■□□□ 1.14
U2AF1-203ENST00000398137 KHDRBS3O75525 346 aaKnown RBP22.17■■□□□ 1.14
U2AF1-203ENST00000398137 ZNF3P17036 446 aa22.17■■□□□ 1.14
U2AF1-203ENST00000398137 POLR2IP36954 125 aaKnown RBP22.17■■□□□ 1.14
U2AF1-203ENST00000398137 CAPZA2P47755 286 aa22.17■■□□□ 1.14
U2AF1-203ENST00000398137 BEX5Q5H9J7 111 aa22.17■■□□□ 1.14
U2AF1-203ENST00000398137 SEZ6L2Q6UXD5 910 aa22.17■■□□□ 1.14
U2AF1-203ENST00000398137 SLC22A24Q8N4F4 322 aa22.17■■□□□ 1.14
U2AF1-203ENST00000398137 OR9Q1Q8NGQ5 310 aa22.17■■□□□ 1.14
U2AF1-203ENST00000398137 SEC61A2Q9H9S3 476 aa22.17■■□□□ 1.14
U2AF1-203ENST00000398137 RNPEPL1Q9HAU8 725 aa22.17■■□□□ 1.14
U2AF1-203ENST00000398137 ARPC4-TTLL3A0A0A6YYG9 625 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 ZAR1LA6NP61 321 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 SURF4O15260 269 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 HMGN1P05114 100 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 FOSL1P15407 271 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 RAD23AP54725 363 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 MRPS34P82930 218 aaKnown RBP22.16■■□□□ 1.14
U2AF1-203ENST00000398137 NPRL3Q12980 569 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 ZIK1Q3SY52 487 aaPredicted RBP22.16■■□□□ 1.14
U2AF1-203ENST00000398137 DNM1P34Q6PK57 102 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 OR6V1Q8N148 313 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 NABP1Q96AH0 204 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 PLPPR2Q96GM1 343 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 DDOQ99489 341 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 SMR3AQ99954 134 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 SH3GL3Q99963 347 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 TEX12Q9BXU0 123 aa22.16■■□□□ 1.14
U2AF1-203ENST00000398137 SRA1Q9HD15 236 aaKnown RBP22.16■■□□□ 1.14
U2AF1-203ENST00000398137 COA3Q9Y2R0 106 aaPredicted RBP22.16■■□□□ 1.14
U2AF1-203ENST00000398137 IGLV1-36A0A0B4J1U3 117 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 ZNF503-AS2A6NEH8 195 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 M0R129 80 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 HLA-HP01893 362 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 OR8G3PP0DMU2 310 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 CRABP1P29762 137 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 CENPAP49450 140 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 SGCAQ16586 387 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 ZNF704Q6ZNC4 412 aaPredicted RBP22.15■■□□□ 1.14
U2AF1-203ENST00000398137 FOXL2NBQ6ZUU3 175 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 SKA3Q8IX90 412 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 LRRC75A-AS1Q8N1F1 130 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 PIGTQ969N2 578 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 PLEKHA8Q96JA3 519 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 C1QTNF6Q9BXI9 259 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 OBP2BQ9NPH6 170 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 TVP23BQ9NYZ1 205 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 NPAP1Q9NZP6 1156 aa22.15■■□□□ 1.14
U2AF1-203ENST00000398137 RRP15Q9Y3B9 282 aaKnown RBP22.15■■□□□ 1.14
U2AF1-203ENST00000398137 FAM183AA6NL82 134 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 FAM171A2A8MVW0 826 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 FARS2O95363 451 aaKnown RBP22.14■■□□□ 1.13
U2AF1-203ENST00000398137 WNT11O96014 354 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 HOXB4P17483 251 aaPredicted RBP22.14■■□□□ 1.13
U2AF1-203ENST00000398137 PYCR1P32322 319 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 ZNF83P51522 516 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 SLX4IPQ5VYV7 408 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 SHEQ5VZ18 495 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 C20orf204Q6ZNR8 217 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 LRRC18Q8N456 261 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 GALNT4Q8N4A0 578 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 OTULINQ96BN8 352 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 POM121Q96HA1 1249 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 SLC38A2Q96QD8 506 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 MBOAT4Q96T53 435 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 CCL19Q99731 98 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 RACGAP1Q9H0H5 632 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 TOR3AQ9H497 397 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 MED20Q9H944 212 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 ZNF224Q9NZL3 707 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 B9D1Q9UPM9 204 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 FKBP7Q9Y680 259 aa22.14■■□□□ 1.13
U2AF1-203ENST00000398137 CASQ2O14958 399 aaPredicted RBP22.13■■□□□ 1.13
U2AF1-203ENST00000398137 GPANK1O95872 356 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 CD79AP11912 226 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 HOXB1P14653 301 aaPredicted RBP22.13■■□□□ 1.13
U2AF1-203ENST00000398137 NPR2P20594 1047 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 GUCA1AP43080 201 aaPredicted RBP22.13■■□□□ 1.13
U2AF1-203ENST00000398137 SLC34A1Q06495 639 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 SNAPC1Q16533 368 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 NRN1LQ496H8 165 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 Q5PR19 223 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 OTPQ5XKR4 325 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 C12orf73Q69YU5 71 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 ZBTB46Q86UZ6 589 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 GLB1L2Q8IW92 636 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 PROKR2Q8NFJ6 384 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 LILRB1Q8NHL6 650 aaPredicted RBP22.13■■□□□ 1.13
U2AF1-203ENST00000398137 FGFBP3Q8TAT2 258 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 NANOS1Q8WY41 292 aaKnown RBP22.13■■□□□ 1.13
U2AF1-203ENST00000398137 HCAR1Q9BXC0 346 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 PRRG3Q9BZD7 231 aa22.13■■□□□ 1.13
U2AF1-203ENST00000398137 SIAEQ9HAT2 523 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms