RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 DUX4Q9UBX2 424 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 SLC5A6Q9Y289 635 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 C2orf16Q68DN1 1984 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 A0A096LPE4 126 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 A0A1W2PPZ6 126 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 SEC14L2O76054 403 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 B4GALT1P15291 398 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 RIPPLY1Q0D2K3 151 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 CARTPTQ16568 116 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ABCA11PQ4W5N1 156 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 DESI1Q6ICB0 168 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF782Q6ZMW2 699 aaPredicted RBP7.43□□□□□ -1.22
PTPRD-204ENST00000397606 SLC46A3Q7Z3Q1 461 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 NINJ1Q92982 152 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 MOV10Q9HCE1 1003 aaKnown RBP7.43□□□□□ -1.22
PTPRD-204ENST00000397606 FGF20Q9NP95 211 aaPredicted RBP7.43□□□□□ -1.22
PTPRD-204ENST00000397606 NRIP3Q9NQ35 241 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 NUFIP1Q9UHK0 495 aaKnown RBP7.43□□□□□ -1.22
PTPRD-204ENST00000397606 LOC102723996A0A087X1L8 192 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 M0R135 149 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 OIP5O43482 229 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 YES1P07947 543 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 PGAM2P15259 253 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 JUNBP17275 347 aaPredicted RBP7.43□□□□□ -1.22
PTPRD-204ENST00000397606 PTGER4P35408 488 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 IDH3GP51553 393 aaPredicted RBP7.43□□□□□ -1.22
PTPRD-204ENST00000397606 TIPARPQ7Z3E1 657 aaKnown RBP7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF584Q8IVC4 421 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 OR52H1Q8NGJ2 320 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 OR6X1Q8NH79 312 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 TRMT10AQ8TBZ6 339 aaKnown RBP7.43□□□□□ -1.22
PTPRD-204ENST00000397606 C11orf40Q8WZ69 217 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF799Q96GE5 643 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 IMMP1LQ96LU5 166 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 SORCS2Q96PQ0 1159 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ANKRD33BA6NCL7 494 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 OR6C6A6NF89 314 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ACOD1A6NK06 481 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 P2RY10O00398 339 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CRTAPO75718 401 aaPredicted RBP7.42□□□□□ -1.22
PTPRD-204ENST00000397606 MPIG6BO95866 241 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ARSBP15848 533 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ETV1P50549 477 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 SPOCK1Q08629 439 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 AQP6Q13520 282 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 C1QL3Q5VWW1 255 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CORO6Q6QEF8 472 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 OR13F1Q8NGS4 319 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 OR13C9Q8NGT0 318 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 TNFAIP8L1Q8WVP5 186 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 MED18Q9BUE0 208 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 DNAJB11Q9UBS4 358 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 SCP2D1Q9UJQ7 156 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CKAP5Q14008 2032 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 RP1P56715 2156 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 TGFBR3LH3BV60 316 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CDK2AP1O14519 115 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CBFA2T3O75081 653 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 RPS4Y1P22090 263 aaKnown RBP7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ACHEP22303 614 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 BDKRB2P30411 391 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 NBL1P41271 181 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 BMXP51813 675 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 BDH1Q02338 343 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 GPR176Q14439 515 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ATP1A1-AS1Q5TC04 95 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 UBE2UQ5VVX9 321 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 THSD4Q6ZMP0 1018 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 DOK3Q7L591 496 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 SERPINA12Q8IW75 414 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 GCNT2Q8N0V5 402 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CCDC107Q8WV48 283 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 RFT1Q96AA3 541 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 TSPAN32Q96QS1 320 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 NELFAQ9H3P2 528 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ACOXLQ9NUZ1 547 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ABRACLQ9P1F3 81 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 DUSP13Q9UII6 198 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 NINQ8N4C6 2090 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 AQP7P3A6NL99 342 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 DISC1C4P0D8 188 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 RBMXL2O75526 392 aaKnown RBP7.42□□□□□ -1.22
PTPRD-204ENST00000397606 SERPINA5P05154 406 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CSN2P05814 226 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 UMODP07911 640 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CD53P19397 219 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 GMFBP60983 142 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 RPS25P62851 125 aaKnown RBP7.42□□□□□ -1.22
PTPRD-204ENST00000397606 USP51Q70EK9 711 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CISD2Q8N5K1 135 aaKnown RBP7.42□□□□□ -1.22
PTPRD-204ENST00000397606 TMEM251Q8N6I4 163 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 CCDC54Q8NEL0 328 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 FNDC9Q8TBE3 224 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 PSD2Q9BQI7 771 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ISYNA1Q9NPH2 558 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF701Q9NV72 531 aaPredicted RBP7.42□□□□□ -1.22
PTPRD-204ENST00000397606 KCNN3Q9UGI6 736 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 GDF2Q9UK05 429 aaPredicted RBP7.42□□□□□ -1.22
PTPRD-204ENST00000397606 ACACAQ13085 2346 aa7.42□□□□□ -1.22
PTPRD-204ENST00000397606 TRDV1A0A1B0GX56 115 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms