RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ZNF837Q96EG3 531 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 ALKBH3Q96Q83 286 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 INTS14Q96SY0 518 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 ZNF649Q9BS31 505 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 WDR76Q9H967 626 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 GPR35Q9HC97 309 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 B3GAT2Q9NPZ5 323 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 SLC7A10Q9NS82 523 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 C12orf71A8MTZ7 269 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 HLA-DQA2P01906 255 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 HRGP04196 525 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 SCG5P05408 212 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 LIMS3P0CW19 117 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 LIMS4P0CW20 117 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 TIMP3P35625 211 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 MAP2K4P45985 399 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 OR3A2P47893 321 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 ETV1P50549 477 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 TBCEQ15813 527 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 MEP1BQ16820 701 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 XAF1Q6GPH4 301 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 C3P1Q6ZMU1 363 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 SLC35F2Q8IXU6 374 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 ACBD7Q8N6N7 88 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 TTYH2Q9BSA4 534 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 C12orf49Q9H741 205 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 CRLF2Q9HC73 371 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 CLEC2DQ9UHP7 191 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 TINAGQ9UJW2 476 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 EXOSC1Q9Y3B2 195 aaKnown RBP14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 EMC9Q9Y3B6 208 aa14.92□□□□□ -0.02
TSPAN4-205ENST00000397406 NCOA6Q14686 2063 aaPredicted RBP14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 A0A1W2PPL8 197 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 RPL36A-HNRNPH2H7BZ11 118 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 TNFSF13O75888 250 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 CLPTM1O96005 669 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 IGHV3-9P01782 118 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 TFAP2AP05549 437 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 OR2T7P0C7T2 308 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 CEACAM8P31997 349 aaPredicted RBP14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 CDAP32320 146 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 HCCSP53701 268 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 ACTC1P68032 377 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 ACTA1P68133 377 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 SIRPAP78324 504 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 FOXF2Q12947 444 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 KCNMB1Q16558 191 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 OTPQ5XKR4 325 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 KCTD8Q6ZWB6 473 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 CDC20BQ86Y33 519 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 ZNF100Q8IYN0 542 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 SVOPQ8N4V2 548 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 RFLNBQ8N5W9 214 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 OR10H4Q8NGA5 316 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 OR6K3Q8NGY3 331 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 OR6N2Q8NGY6 317 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 OR2T27Q8NH04 317 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 ITLN2Q8WWU7 325 aaPredicted RBP14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 C11orf40Q8WZ69 217 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 NABP1Q96AH0 204 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 ZFP3Q96NJ6 502 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 TBX5Q99593 518 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 RBM24Q9BX46 236 aaKnown RBP14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 YIPF3Q9GZM5 350 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 ACOT13Q9NPJ3 140 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 POLE4Q9NR33 117 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 INPP5EQ9NRR6 644 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 ERVK13-1Q9NX77 482 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 PRSS50Q9UI38 385 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 COPS3Q9UNS2 423 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 CRYBG3Q68DQ2 2970 aa14.91□□□□□ -0.02
TSPAN4-205ENST00000397406 A0A1W2PQL4 384 aaPredicted RBP14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 ZNF593O00488 134 aaPredicted RBP14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 PTHP01270 115 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 CRHP06850 196 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 TMIGD3P0DMS9 266 aaPredicted RBP14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 GLI4P10075 376 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 MYL12AP19105 171 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 RPS27P42677 84 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 CA7P43166 264 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 ENTPD1P49961 510 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 ZNF84P51523 738 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 ROR2Q01974 943 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 ZNF85Q03923 595 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 BLMHQ13867 455 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 CDSNQ15517 529 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 STK11Q15831 433 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 PCK2Q16822 640 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 CEACAM16Q2WEN9 425 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 TEX30Q5JUR7 227 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 VWA1Q6PCB0 445 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 TFAP2EQ6VUC0 442 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 NCCRP1Q6ZVX7 275 aaPredicted RBP14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 LHFPL3Q86UP9 236 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 NANOGP1Q8N7R0 232 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 NAXEQ8NCW5 288 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 CCDC120Q96HB5 630 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 SEC61A2Q9H9S3 476 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 MALT1Q9UDY8 824 aa14.9□□□□□ -0.02
TSPAN4-205ENST00000397406 NOTCH2Q04721 2471 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms