RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 TFF2Q03403 129 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 SRSF4Q08170 494 aaKnown RBP21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 RUNX3Q13761 415 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 ATPAF1Q5TC12 328 aaPredicted RBP21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 ULK3Q6PHR2 472 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 METTL27Q8N6F8 245 aaPredicted RBP21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 MOGAT1Q96PD6 335 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 MYADMQ96S97 322 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 ZFYVE21Q9BQ24 234 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 SLC25A21Q9BQT8 299 aaPredicted RBP21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 TRIM2Q9C040 744 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 C2orf16Q68DN1 1984 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 SEC16AO15027 2179 aa21.71■■□□□ 1.07
CSNK1E-203ENST00000396832 CSTAP01040 98 aa21.7■■□□□ 1.07
CSNK1E-203ENST00000396832 AMY2AP04746 511 aa21.7■■□□□ 1.07
CSNK1E-203ENST00000396832 ZNF542PQ5EBM4 170 aa21.7■■□□□ 1.07
CSNK1E-203ENST00000396832 GALNT16Q8N428 558 aa21.7■■□□□ 1.07
CSNK1E-203ENST00000396832 OR6N2Q8NGY6 317 aa21.7■■□□□ 1.07
CSNK1E-203ENST00000396832 ZMAT3Q9HA38 289 aaKnown RBP21.7■■□□□ 1.07
CSNK1E-203ENST00000396832 ARID1AO14497 2285 aa21.7■■□□□ 1.07
CSNK1E-203ENST00000396832 URADA6NGE7 173 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 GLCEO94923 617 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 RBM34P42696 430 aaKnown RBP21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 TAS2R19P59542 299 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 ARHGAP40Q5TG30 622 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 LPCAT3Q6P1A2 487 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 NDUFAF7Q7L592 441 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 JAZF1Q86VZ6 243 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNF676Q8N7Q3 588 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 INO80EQ8NBZ0 244 aaPredicted RBP21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 RCBTB1Q8NDN9 531 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNF417Q8TAU3 575 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 GPX8Q8TED1 209 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 ANKRD9Q96BM1 317 aaPredicted RBP21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 NMNAT2Q9BZQ4 307 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 ATG5Q9H1Y0 275 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 SPACA6W5XKT8 324 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 FAM25EA8MYX2 175 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 C2orf76Q3KRA6 126 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 LINC01590Q5TEZ4 76 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 TMEM205Q6UW68 189 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 OR6S1Q8NH40 331 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 ARL11Q969Q4 196 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 ZBTB8AQ96BR9 441 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 KLHDC3Q9BQ90 382 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 WDR76Q9H967 626 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 FBXL21Q9UKT6 434 aa21.7■■□□□ 1.06
CSNK1E-203ENST00000396832 SRPX2O60687 465 aaPredicted RBP21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 HLA-AP01891 365 aaKnown RBP21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 ACTBP60709 375 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 ACTG1P63261 375 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 DPY19L2P2Q6ZN68 376 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 DPY19L4Q7Z388 723 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 CA13Q8N1Q1 262 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 OR5AP2Q8NGF4 316 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 PPP1R14AQ96A00 147 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 HEBP2Q9Y5Z4 205 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 CSN2P05814 226 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNF10P21506 573 aaPredicted RBP21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 OR7A5Q15622 319 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 RBMS3Q6XE24 437 aaKnown RBP21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 CCDC3Q9BQI4 270 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 WDFY3Q8IZQ1 3526 aa21.69■■□□□ 1.06
CSNK1E-203ENST00000396832 ITGA5P08648 1049 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 TSC22D1Q15714 1073 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 NPSR1Q6W5P4 371 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 YBX2Q9Y2T7 364 aaKnown RBP21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 A0A087WV62 115 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 C17orf51A8MQB3 221 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 TGFBR3LH3BV60 316 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 ALOX12BO75342 701 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 NKX2-2O95096 273 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 ADH1BP00325 375 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 S100A9P06702 114 aaKnown RBP21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 SCGB2B2Q4G0G5 96 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 FAM109BQ6ICB4 259 aaPredicted RBP21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 PARGQ86W56 976 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 CSNK1A1LQ8N752 337 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 OR4A4PQ8NGN8 299 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 SEH1LQ96EE3 360 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 SEC11CQ9BY50 192 aa21.68■■□□□ 1.06
CSNK1E-203ENST00000396832 LOC100509620A0A075B734 347 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 TRBV5-7A0A0A0MS05 114 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 OR2T1O43869 369 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 CDC40O60508 579 aaKnown RBP eCLIP21.67■■□□□ 1.062e-7■■□□□ 14
CSNK1E-203ENST00000396832 HEXAP06865 529 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 CD79AP11912 226 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 CBR1P16152 277 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 ABOP16442 354 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 CENPAP49450 140 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 PRKXP51817 358 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 SSBP1Q04837 148 aaKnown RBP21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 ENPP2Q13822 863 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNHIT3Q15649 155 aaPredicted RBP21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 PRAMEF17Q5VTA0 474 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 SLC35D2Q76EJ3 337 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 FAM3DQ96BQ1 224 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 UQCC1Q9NVA1 299 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 DHCR7Q9UBM7 475 aaKnown RBP21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 FARSAQ9Y285 508 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms