RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 FAM72BQ86X60 149 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 SLC35B4Q969S0 331 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 CHRDL1Q9BU40 450 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 ALPK2Q86TB3 2170 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 A0A0B4J203 849 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 NPIPB15A6NHN6 443 aaPredicted RBP9.54□□□□□ -0.88
COL4A4-201ENST00000396625 SH2D7A6NKC9 451 aaPredicted RBP9.54□□□□□ -0.88
COL4A4-201ENST00000396625 CSO75390 466 aaKnown RBP9.54□□□□□ -0.88
COL4A4-201ENST00000396625 CNMDO75829 334 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 RPL24P83731 157 aaKnown RBP9.54□□□□□ -0.88
COL4A4-201ENST00000396625 MTMR14Q8NCE2 650 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 FAM3CQ92520 227 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 RNF39Q9H2S5 420 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 VAPAQ9P0L0 249 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 ZNF320A2RRD8 509 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 RAF1P04049 648 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 MTNR1BP49286 362 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 ZP2Q05996 745 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 SLC35G1Q2M3R5 365 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 NAXDQ8IW45 347 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 TRAV34A0A0B4J273 112 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 HCRTO43612 131 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 CSF3P09919 207 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 OR5G3P0C626 314 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 DDOSTP39656 456 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 ZNF85Q03923 595 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 WDR74Q6RFH5 385 aaPredicted RBP9.54□□□□□ -0.88
COL4A4-201ENST00000396625 A0A087WV62 115 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 DOK2O60496 412 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 CPMP14384 443 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 SRP9P49458 86 aaKnown RBP9.54□□□□□ -0.88
COL4A4-201ENST00000396625 CLDN17P56750 224 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 EMC10Q5UCC4 262 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 GNPNAT1Q96EK6 184 aaPredicted RBP9.54□□□□□ -0.88
COL4A4-201ENST00000396625 SLC17A9Q9BYT1 436 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 LRRC3CA6NJW4 275 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 YIF1AO95070 293 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 ALPLP05186 524 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 C5AR1P21730 350 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 NCR3LG1Q68D85 454 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 LIPIQ6XZB0 460 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 CLRN3Q8NCR9 226 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 SLC7A6Q92536 515 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 RIMBP3CA6NJZ7 1639 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 RIMBP3BA6NNM3 1639 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 RIMBP3Q9UFD9 1639 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 NALCNQ8IZF0 1738 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 OR5K3A6NET4 321 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 LGI1O95970 557 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 BMP1P13497 986 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 NDUFB7P17568 137 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 ITGB7P26010 798 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 TMEM176BQ3YBM2 270 aaPredicted RBP9.54□□□□□ -0.88
COL4A4-201ENST00000396625 KDM4DQ6B0I6 523 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 OR5AR1Q8NGP9 310 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 OR51H1Q8NH63 302 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 SLC39A13Q96H72 371 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 BCO1Q9HAY6 547 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 GABRR3A8MPY1 467 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 ADRA2CP18825 462 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 NPY1RP25929 384 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 CDC34P49427 236 aaPredicted RBP9.54□□□□□ -0.88
COL4A4-201ENST00000396625 TBPL2Q6SJ96 375 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 TFAP2EQ6VUC0 442 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 WDR88Q6ZMY6 472 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 VRK2Q86Y07 508 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 ACOT4Q8N9L9 421 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 NEIL2Q969S2 332 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 CA14Q9ULX7 337 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 SYT5O00445 386 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 KIR2DL3P43628 341 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 CST6Q15828 149 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 ADPRMQ3LIE5 342 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 CLEC4DQ8WXI8 215 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 GABARAPL1Q9H0R8 117 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 IFT22Q9H7X7 185 aa9.54□□□□□ -0.88
COL4A4-201ENST00000396625 PLIN4Q96Q06 1357 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 FAM24AA6NFZ4 105 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 HAPLN1P10915 354 aaPredicted RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 NKX2-1P43699 371 aaPredicted RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 TEKQ02763 1124 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SMN1Q16637 294 aaKnown RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 HENMT1Q5T8I9 393 aaKnown RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 OSTM1Q86WC4 334 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SLC25A46Q96AG3 418 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 NKX2-4Q9H2Z4 354 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SUSD2Q9UGT4 822 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 J3KTA2 159 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 EFSO43281 561 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 ATP1B1P05026 303 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 LCTLQ6UWM7 567 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 GPR62Q9BZJ7 368 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 PPP1R3CQ9UQK1 317 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SCGB1A1P11684 91 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 AKR1C3P42330 323 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 VASPP50552 380 aaPredicted RBP9.53□□□□□ -0.88
COL4A4-201ENST00000396625 SLC35A1P78382 337 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 RING1Q06587 406 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 C1orf61Q13536 156 aa9.53□□□□□ -0.88
COL4A4-201ENST00000396625 ACVR1CQ8NER5 493 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms