RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CIB3Q96Q77 187 aaPredicted RBP14.29□□□□□ -0.12
GNE-202ENST00000396594 EDEM2Q9BV94 578 aa14.29□□□□□ -0.12
GNE-202ENST00000396594 FGF17O60258 216 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 TUBG1P23258 451 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 NKAIN2Q5VXU1 208 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 NUFIP2Q7Z417 695 aaKnown RBP14.28□□□□□ -0.12
GNE-202ENST00000396594 SLC25A46Q96AG3 418 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 DCLRE1CQ96SD1 692 aaKnown RBP14.28□□□□□ -0.12
GNE-202ENST00000396594 SLAMF8Q9P0V8 285 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 A0A0U1RQS6 177 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 KRBA1A5PL33 1030 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 CAPNS1P04632 268 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 GYPBP06028 91 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 TPOP07202 933 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 SHBQ15464 509 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 ZNF74Q16587 644 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 ZNF529Q6P280 563 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 USP51Q70EK9 711 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 ACBD4Q8NC06 268 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 DMBX1Q8NFW5 382 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 CHST6Q9GZX3 395 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 SNX11Q9Y5W9 270 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 DEGS1O15121 323 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 PRR35P0CG20 571 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 HOXA1P49639 335 aaPredicted RBP14.28□□□□□ -0.12
GNE-202ENST00000396594 FAM180BQ6P0A1 224 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 SLC51BQ86UW2 128 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 GAB3Q8WWW8 586 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 PP6455Q8WZ26 134 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 RBMXL1Q96E39 390 aaKnown RBP14.28□□□□□ -0.12
GNE-202ENST00000396594 SMIM14Q96QK8 99 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 NXF5Q9H1B4 397 aaKnown RBP14.28□□□□□ -0.12
GNE-202ENST00000396594 MRPL15Q9P015 296 aaKnown RBP14.28□□□□□ -0.12
GNE-202ENST00000396594 PIGLQ9Y2B2 252 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 TRAV1-2A0A0B4J238 106 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 PRSS37A4D1T9 235 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 CRYAAP02489 173 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 FBXO45P0C2W1 286 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 HYAL1Q12794 435 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 DYRK1AQ13627 763 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 OR8G1Q15617 311 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 ZNF546Q86UE3 836 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 WWTR1Q9GZV5 400 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 M0R082 166 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 TGOLN2O43493 480 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 NKX2-2O95096 273 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 CISD3P0C7P0 127 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 HTR2BP41595 481 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 CCL11P51671 97 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 GAB1Q13480 694 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 LRRC18Q8N456 261 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 OR4D9Q8NGE8 314 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 CNTNAP3Q9BZ76 1288 aa14.28□□□□□ -0.12
GNE-202ENST00000396594 TCEAL2Q9H3H9 227 aaPredicted RBP14.28□□□□□ -0.12
GNE-202ENST00000396594 ST6GAL1P15907 406 aa14.27□□□□□ -0.12
GNE-202ENST00000396594 NFYBP25208 207 aa14.27□□□□□ -0.12
GNE-202ENST00000396594 CD79BP40259 229 aa14.27□□□□□ -0.12
GNE-202ENST00000396594 LUMP51884 338 aaPredicted RBP14.27□□□□□ -0.12
GNE-202ENST00000396594 PPIAP62937 165 aaKnown RBP14.27□□□□□ -0.12
GNE-202ENST00000396594 ZNF718Q3SXZ3 478 aa14.27□□□□□ -0.12
GNE-202ENST00000396594 GLYR1Q49A26 553 aaPredicted RBP14.27□□□□□ -0.12
GNE-202ENST00000396594 ESPNLQ6ZVH7 1005 aa14.27□□□□□ -0.12
GNE-202ENST00000396594 NPEPL1Q8NDH3 523 aa14.27□□□□□ -0.12
GNE-202ENST00000396594 OPALINQ96PE5 141 aa14.27□□□□□ -0.12
GNE-202ENST00000396594 A0A1W2PPC1 479 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 C7orf72A4D263 438 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 SPI1P17947 270 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 TGM4P49221 684 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 RNLSQ5VYX0 342 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 SVBPQ8N300 66 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 EDARADDQ8WWZ3 215 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 EMG1Q92979 244 aaKnown RBP14.27□□□□□ -0.13
GNE-202ENST00000396594 SLAMF6Q96DU3 332 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 ASF1BQ9NVP2 202 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 HMX2A2RU54 273 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 IFI6P09912 130 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 GABRG2P18507 467 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 AADACP22760 399 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 RPS18P62269 152 aaKnown RBP14.27□□□□□ -0.13
GNE-202ENST00000396594 CLN3Q13286 438 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 AADACL4Q5VUY2 407 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 B3GLCTQ6Y288 498 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 RNF141Q8WVD5 230 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 PRSS44E7EML9 344 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 SFTPCP11686 197 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 DTYMKP23919 212 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 SLC35A2P78381 396 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 HNF4GQ14541 408 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.27□□□□□ -0.13
GNE-202ENST00000396594 LINC00696Q6ZRV3 163 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 GCNT2Q8N0V5 402 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 ZNF687Q8N1G0 1237 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 OR1S2Q8NGQ3 325 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 BIN3Q9NQY0 253 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 SLC23A2Q9UGH3 650 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 SLC5A6Q9Y289 635 aa14.27□□□□□ -0.13
GNE-202ENST00000396594 P2RY10O00398 339 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 TMPRSS11DO60235 418 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 ALDH3B1P43353 468 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms