RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 OR6K3Q8NGY3 331 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 OR4Q3Q8NH05 313 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 RAB8BQ92930 207 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 MRPL48Q96GC5 212 aaKnown RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 MCHR1Q99705 422 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 PTDSS2Q9BVG9 487 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 TEX12Q9BXU0 123 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 POTEKPQ9BYX7 375 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 OR51M1Q9H341 326 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 PLEKHA1Q9HB21 404 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 MMP25Q9NPA2 562 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 VSX1Q9NZR4 365 aaPredicted RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 H2AFY2Q9P0M6 372 aaPredicted RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 RASD1Q9Y272 281 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 CDH23Q9H251 3354 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 OGG1O15527 345 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 PRKRAO75569 313 aaKnown RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 DXOO77932 396 aaKnown RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 S100A8P05109 93 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 SPI1P17947 270 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 ZNF750Q32MQ0 723 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 FAM74A1Q5RGS3 127 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 NIPAL3Q6P499 406 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 UQCC3Q6UW78 93 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 BAIAP2L2Q6UXY1 529 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 MOB3CQ70IA8 216 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 PGAP1Q75T13 922 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 ANKRD37Q7Z713 158 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 LHFPL3Q86UP9 236 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 KLHL36Q8N4N3 616 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 C12orf45Q8N5I9 185 aaPredicted RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 C2orf73Q8N5S3 287 aaPredicted RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 ZNF614Q8N883 585 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 COX18Q8N8Q8 333 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 APCDD1LQ8NCL9 501 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 OR2T33Q8NG76 320 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 TRMT10AQ8TBZ6 339 aaKnown RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 SMIM4Q8WVI0 70 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 XAGE5Q8WWM1 108 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 WDR89Q96FK6 387 aaPredicted RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 BOD1Q96IK1 185 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 CCDC3Q9BQI4 270 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 IFT27Q9BW83 186 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 WWTR1Q9GZV5 400 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 UNKLQ9H9P5 680 aaKnown RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 SEBOXQ9HB31 216 aaPredicted RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 MEPEQ9NQ76 525 aaPredicted RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 CTPS2Q9NRF8 586 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 RASL12Q9NYN1 266 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 MED11Q9P086 117 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 MIOXQ9UGB7 285 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 FLVCR2Q9UPI3 526 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 ZNF337Q9Y3M9 751 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 A0A1W2PQM1 296 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 ANKUB1A6NFN9 424 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SNRPGP15A8MWD9 76 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 TMEM150CB9EJG8 249 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 LRRN3E7EW58 273 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PLPP2O43688 288 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 RAD1O60671 282 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 IL5P05113 134 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 KLK3P07288 261 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 SPP1P10451 314 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 NR2C1P13056 603 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 ZNF17P17021 662 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 ZNF3P17036 446 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PSMB1P20618 241 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 FBLP22087 321 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 DCTDP32321 178 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 VEGFCP49767 419 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 RPS26P62854 115 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 LGALS3BPQ08380 585 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 DMWDQ09019 674 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 MELKQ14680 651 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 KCNMB1Q16558 191 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 ELP2Q6IA86 826 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 LIN54Q6MZP7 749 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 ZNF322Q6U7Q0 402 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 DNM1P46Q6ZS02 220 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 RBM45Q8IUH3 476 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 C9orf40Q8IXQ3 194 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PUSL1Q8N0Z8 303 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 FRMD1Q8N878 549 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SPRYD4Q8WW59 207 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 EDARADDQ8WWZ3 215 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 THRSPQ92748 146 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SGK3Q96BR1 496 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 C3orf49Q96BT1 292 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 IMMP1LQ96LU5 166 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PFDN5Q99471 154 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 CACYBPQ9HB71 228 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 C5AR2Q9P296 337 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 MYEF2Q9P2K5 600 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 OPN4Q9UHM6 478 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 CAMK2AQ9UQM7 478 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PCSK5Q92824 1860 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 EML6Q6ZMW3 1958 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 A0A1B0GW55 424 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 NAP1L6A6NFF2 107 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SLC22A31A6NKX4 558 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms