RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RPS19BP1Q86WX3 136 aaKnown RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 CATSPERDQ86XM0 798 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 OR6K3Q8NGY3 331 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 C11orf40Q8WZ69 217 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 C3orf49Q96BT1 292 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 PDXPQ96GD0 296 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 TIMD4Q96H15 378 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SLC22A11Q9NSA0 550 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ACOT8O14734 319 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SRFP11831 508 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 UBE2KP61086 200 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SORDQ00796 357 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 SMAD2Q15796 467 aaKnown RBP5.01□□□□□ -1.61
VPS13C-204ENST00000395898 STEAP3Q658P3 488 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 PLPP7Q8NBV4 271 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 PFN4Q8NHR9 129 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ST8SIA1Q92185 356 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 RTL8AQ9BWD3 113 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 ADAM19Q9H013 955 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 BCO1Q9HAY6 547 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 PDFQ9HBH1 243 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 CHST11Q9NPF2 352 aa5.01□□□□□ -1.61
VPS13C-204ENST00000395898 RALGAPA1Q6GYQ0 2036 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SNRNP70P08621 437 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 EN2P19622 333 aaPredicted RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 EPHA5P54756 1037 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 EDDM3BP56851 147 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SPRED3Q2MJR0 410 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SLC51BQ86UW2 128 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF573Q86YE8 665 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 C15orf54Q8N8G6 183 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TECTBQ96PL2 329 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 OPA3Q9H6K4 179 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TAF9BQ9HBM6 251 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 HCSTQ9UBK5 93 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TBC1D29Q9UFV1 150 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 RNF150Q9ULK6 438 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 DSCR3O14972 297 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SBK2P0C263 348 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 JUNBP17275 347 aaPredicted RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 MRPL19P49406 292 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 TEKQ02763 1124 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 PRTGQ2VWP7 1150 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TFAP2EQ6VUC0 442 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 H2BFWTQ7Z2G1 175 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TEX19Q8NA77 164 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 KLF13Q9Y2Y9 288 aaPredicted RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 C20orf202A1L168 122 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ZIC2O95409 532 aaPredicted RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 PMP2P02689 132 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 CSF3P09919 207 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 FOLR1P15328 257 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ITGB8P26012 769 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 RPL35P42766 123 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 NPBWR1P48145 328 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 RPL34P49207 117 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 PPT1P50897 306 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 LTC4SQ16873 150 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF813Q6ZN06 617 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TMPRSS7Q7RTY8 843 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 FAM26EQ8N5C1 309 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SEH1LQ96EE3 360 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 THOC3Q96J01 351 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 DCLRE1CQ96SD1 692 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 SCPEP1Q9HB40 452 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF355PQ9NSJ1 428 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 NDRG3Q9UGV2 375 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 HMGN4O00479 90 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 OPCMLQ14982 345 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 HIST2H3PS2Q5TEC6 136 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TBPL2Q6SJ96 375 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 PARM1Q6UWI2 310 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 LINC00346Q8IVM7 164 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 BAHD1Q8TBE0 780 aaPredicted RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 LKAAEAR1Q8TD35 194 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ARV1Q9H2C2 271 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TAS2R16Q9NYV7 291 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ANKRD36A6QL64 1941 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TRABD2BA6NFA1 517 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM202A6NGA9 273 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 K7ESM1 405 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SOCS6O14544 535 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 PLRG1O43660 514 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 TBPP20226 339 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 MMP11P24347 488 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 CLDN12P56749 244 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 RPS25P62851 125 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 HTRA3P83110 453 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SMAD4Q13485 552 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 OR8G1Q15617 311 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 DHRS4L2Q6PKH6 230 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 KANSL1Q7Z3B3 1105 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ARIH2OSQ8N7S6 290 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 GAB3Q8WWW8 586 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 ASB13Q8WXK3 278 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 H1FXQ92522 213 aaKnown RBP5□□□□□ -1.61
VPS13C-204ENST00000395898 DCBLD2Q96PD2 775 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 SHARPINQ9H0F6 387 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 CMC2Q9NRP2 79 aa5□□□□□ -1.61
VPS13C-204ENST00000395898 C19orf53Q9UNZ5 99 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms