RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 DLSTP36957 453 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 KIR2DS4P43632 304 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 KIR2DS1Q14954 304 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ACKR1Q16570 336 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 LIX1LQ8IVB5 337 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 MKXQ8IYA7 352 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SLC25A45Q8N413 288 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF107Q9UII5 783 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 WASF3Q9UPY6 502 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 J3QW42 95 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CNOT4O95628 575 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 LY86O95711 162 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 LCATP04180 440 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 OPRL1P41146 370 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SLC10A1Q14973 349 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 TRIP6Q15654 476 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CNIH2Q6PI25 160 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 DOK3Q7L591 496 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 AAED1Q7RTV5 226 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 MRGPREQ86SM8 312 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ADGRE4PQ86SQ3 457 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 PTX4Q96A99 478 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 THAP7Q9BT49 309 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 NUDT15Q9NV35 164 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SERPINE3A8MV23 424 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 MRPL3P09001 348 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 OR8G3PP0DMU2 310 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ALKBH1Q13686 389 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 NTRK2Q16620 822 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF658BQ4V348 819 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 THAP6Q8TBB0 222 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 TRMT10AQ8TBZ6 339 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 LRRC20Q8TCA0 184 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 FUZQ9BT04 418 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CTSFQ9UBX1 484 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 TIMM10BQ9Y5J6 103 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 IGHV5-10-1A0A0J9YXX1 117 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 APLNRP35414 380 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 RIN1Q13671 783 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SLC25A24Q6NUK1 477 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 TBPL2Q6SJ96 375 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF782Q6ZMW2 699 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 Q8IYB0 196 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 OR1L3Q8NH93 324 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF426Q9BUY5 554 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF593O00488 134 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ERV3-1Q14264 604 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF791Q3KP31 576 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SLAMF9Q96A28 289 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 PHB2Q99623 299 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 RBM38Q9H0Z9 239 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 NELFAQ9H3P2 528 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 GLTPQ9NZD2 209 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 IL20RAQ9UHF4 553 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 DSPP15924 2871 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 M0R233 179 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 HRO43593 1189 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 FCER2P06734 321 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 GABRA1P14867 456 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 FOLR1P15328 257 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 RPS4Y1P22090 263 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 GDF1P27539 372 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CASP3P42574 277 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 PRKXP51817 358 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 RAP2BP61225 183 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 MRPL21Q7Z2W9 205 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 GPR155Q7Z3F1 870 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 GPR32P1Q8NGA4 272 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 OR8S1Q8NH09 359 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 DYNC2LI1Q8TCX1 351 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 OR2M2Q96R28 347 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 MALT1Q9UDY8 824 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 RAB22AQ9UL26 194 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF806P0C7X5 589 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SMIM18P0DKX4 95 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 PSMB1P20618 241 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 LIPAP38571 399 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 MMP15P51511 669 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CTF1Q16619 201 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 NKAIN2Q5VXU1 208 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 OLFML2AQ68BL7 652 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 PWWP2BQ6NUJ5 590 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 WDR53Q7Z5U6 358 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 PRSS35Q8N3Z0 413 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ZG16BQ96DA0 208 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ICAM5Q9UMF0 924 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ALOX5APP20292 161 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 VAMP1P23763 118 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 LIMS1P48059 325 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 EVX1P49640 407 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 BIDP55957 195 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 GUSBP11Q6P575 273 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SHISA6Q6ZSJ9 500 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ATG4DQ86TL0 474 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 PARP16Q8N5Y8 322 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 AIFM2Q9BRQ8 373 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CDH20Q9HBT6 801 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ATPIF1Q9UII2 106 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 A0A1B0GVC2 190 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 OR14I1A6ND48 311 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms