RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 NMNAT3Q96T66 252 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 TSSK6Q9BXA6 273 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 RERGLQ9H628 205 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 SIAEQ9HAT2 523 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 MOKQ9UQ07 419 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 ORC6Q9Y5N6 252 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 ANKRD17O75179 2603 aaKnown RBP14.39□□□□□ -0.11
CXCL1-201ENST00000395761 A0A1W2PPL8 197 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 ATP6V1G2-DDX39BF2Z307 99 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 DCTN6O00399 190 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 SLC16A7O60669 478 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 FARS2O95363 451 aaKnown RBP14.38□□□□□ -0.11
CXCL1-201ENST00000395761 RAF1P04049 648 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 PAX7P23759 505 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 NOS3P29474 1203 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 CALCRP30988 508 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 VHLP40337 213 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 CRISP1P54107 249 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 C3orf36Q3SXR2 165 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 SLC36A3Q495N2 470 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 NRN1LQ496H8 165 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 LEG1Q6P5S2 330 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 FOXL2NBQ6ZUU3 175 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 SLC16A14Q7RTX9 510 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 OR52L1Q8NGH7 329 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 OR4Q3Q8NH05 313 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 NANOS1Q8WY41 292 aaKnown RBP14.38□□□□□ -0.11
CXCL1-201ENST00000395761 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 GABARAPL3Q9BY60 117 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 NUAK2Q9H093 628 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 TBC1D23Q9NUY8 699 aa14.38□□□□□ -0.11
CXCL1-201ENST00000395761 CISD1Q9NZ45 108 aaKnown RBP14.38□□□□□ -0.11
CXCL1-201ENST00000395761 OR6C68A6NDL8 312 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 E7EQL1 145 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 IDH3BO43837 385 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 KHDRBS3O75525 346 aaKnown RBP14.37□□□□□ -0.11
CXCL1-201ENST00000395761 UBL3O95164 117 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 ZNF14P17017 642 aaPredicted RBP14.37□□□□□ -0.11
CXCL1-201ENST00000395761 CD53P19397 219 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 NPR2P20594 1047 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 LAP3P28838 519 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 CDH11P55287 796 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 CDK5Q00535 292 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 NAAAQ02083 359 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.37□□□□□ -0.11
CXCL1-201ENST00000395761 KEAP1Q14145 624 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 RAB39AQ14964 217 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 ZNF362Q5T0B9 420 aaPredicted RBP14.37□□□□□ -0.11
CXCL1-201ENST00000395761 FAM27BQ5VT28 67 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 OTPQ5XKR4 325 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 UGT2A3Q6UWM9 527 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 JAZF1Q86VZ6 243 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 ZNF584Q8IVC4 421 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 LNX2Q8N448 690 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 ZNF611Q8N823 705 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 SDR9C7Q8NEX9 313 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 OR52E2Q8NGJ4 325 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 FBXO17Q96EF6 278 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 RADILQ96JH8 1075 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 FN3KQ9H479 309 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 MOV10Q9HCE1 1003 aaKnown RBP14.37□□□□□ -0.11
CXCL1-201ENST00000395761 SRA1Q9HD15 236 aaKnown RBP14.37□□□□□ -0.11
CXCL1-201ENST00000395761 EMC7Q9NPA0 242 aa14.37□□□□□ -0.11
CXCL1-201ENST00000395761 SMPD3Q9NY59 655 aaPredicted RBP14.37□□□□□ -0.11
CXCL1-201ENST00000395761 COA3Q9Y2R0 106 aaPredicted RBP14.37□□□□□ -0.11
CXCL1-201ENST00000395761 MPZL1O95297 269 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 RAB36O95755 333 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 GPANK1O95872 356 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 MMP7P09237 267 aaPredicted RBP14.36□□□□□ -0.11
CXCL1-201ENST00000395761 DNASE1P24855 282 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 POU1F1P28069 291 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 SLC36A2Q495M3 483 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 C20orf204Q6ZNR8 217 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 OR6V1Q8N148 313 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 DEPDC4Q8N2C3 294 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 IQCF1Q8N6M8 205 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 NPEPL1Q8NDH3 523 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 FBXW5Q969U6 566 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 DDOQ99489 341 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 GRIP2Q9C0E4 1043 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 TOR3AQ9H497 397 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 RNF121Q9H920 327 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 SLC25A19Q9HC21 320 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 RPRD1BQ9NQG5 326 aaKnown RBP14.36□□□□□ -0.11
CXCL1-201ENST00000395761 POLE4Q9NR33 117 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 POU2F3Q9UKI9 436 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 ITGB1BP2Q9UKP3 347 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 B9D1Q9UPM9 204 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 BAIAP2Q9UQB8 552 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 ATP23Q9Y6H3 246 aa14.36□□□□□ -0.11
CXCL1-201ENST00000395761 RAI1Q7Z5J4 1906 aaPredicted RBP14.36□□□□□ -0.11
CXCL1-201ENST00000395761 IGLV1-36A0A0B4J1U3 117 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 IGHV2OR16-5A0A0B4J2B6 119 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 ZAR1LA6NP61 321 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 H3BN98 237 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 SLC16A6O15403 523 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 SNAP29O95721 258 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 RENP00797 406 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 CRYAAP02489 173 aa14.35□□□□□ -0.11
CXCL1-201ENST00000395761 SOD3P08294 240 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms