RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 A0A096LPE4 126 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 LRP5LA4QPB2 252 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 E9PI62 339 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 SLC16A6O15403 523 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 PRPH2P23942 346 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 ECI1P42126 302 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 UBE2KP61086 200 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 OR1S2Q8NGQ3 325 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 TUBB1Q9H4B7 451 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 ZMAT3Q9HA38 289 aaKnown RBP9.51□□□□□ -0.89
COL4A6-203ENST00000394872 IGHV3-15A0A0B4J1V0 119 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 POM121CA8CG34 1229 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 OR2J2O76002 312 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 PPP3CBP16298 524 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 TBXA2RP21731 343 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 POLR2IP36954 125 aaKnown RBP9.51□□□□□ -0.89
COL4A6-203ENST00000394872 TMEM207Q6UWW9 146 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 WDR88Q6ZMY6 472 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 NKAIN4Q8IVV8 208 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 CMTM2Q8TAZ6 248 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 RPL3LQ92901 407 aaKnown RBP9.51□□□□□ -0.89
COL4A6-203ENST00000394872 SDF2Q99470 211 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 ZPBPQ9BS86 351 aa9.51□□□□□ -0.89
COL4A6-203ENST00000394872 CGGBP1Q9UFW8 167 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-203ENST00000394872 CRYM-AS1A6NIL9 109 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 HLA-DOBP13765 273 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 NOVA1P51513 510 aaKnown RBP9.5□□□□□ -0.89
COL4A6-203ENST00000394872 EMP3P54852 163 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 OR6M1Q8NGM8 313 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 IER2Q9BTL4 223 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 LAT2Q9GZY6 243 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 BANF2Q9H503 90 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 LTB4R2Q9NPC1 389 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 PDE4DIPQ5VU43 2346 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 IGHV3-64DA0A0J9YX35 117 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 VAMP5O95183 116 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 LGI1O95970 557 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 HBE1P02100 147 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 ZGLP1P0C6A0 271 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 MYF5P13349 255 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 RFC3P40938 356 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 SELENBP1Q13228 472 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 ANKRD16Q6P6B7 361 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 RBM45Q8IUH3 476 aaKnown RBP9.5□□□□□ -0.89
COL4A6-203ENST00000394872 HPSE2Q8WWQ2 592 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 ZNF705GA8MUZ8 300 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-203ENST00000394872 IMPA2O14732 288 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 FOLR1P15328 257 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 PSMB1P20618 241 aaKnown RBP9.5□□□□□ -0.89
COL4A6-203ENST00000394872 MMP11P24347 488 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 H2BFWTQ7Z2G1 175 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 CISD2Q8N5K1 135 aaKnown RBP9.5□□□□□ -0.89
COL4A6-203ENST00000394872 PLPP5Q8NEB5 264 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 GINS3Q9BRX5 216 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 RIMS4Q9H426 269 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-203ENST00000394872 TBX21Q9UL17 535 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 PPT2Q9UMR5 302 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 SH2D1BO14796 132 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 EDIL3O43854 480 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 SOD1P00441 154 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 GLAP06280 429 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 CSF3P09919 207 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 SSTP61278 116 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 CLINT1Q14677 625 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 NHSL2Q5HYW2 709 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 SUMF1Q8NBK3 374 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 FCRL1Q96LA6 429 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 TMEM43Q9BTV4 400 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 PLEKHF2Q9H8W4 249 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 BCO1Q9HAY6 547 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 NRAPQ86VF7 1730 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 C7orf72A4D263 438 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 HMGN4O00479 90 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 CRYAAP02489 173 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 OR10J4P0C629 311 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 NID1P14543 1247 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 GABRA4P48169 554 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 MRPL58Q14197 206 aaKnown RBP9.5□□□□□ -0.89
COL4A6-203ENST00000394872 MDGA2Q7Z553 956 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 DEFB108BQ8NET1 73 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 NAA50Q9GZZ1 169 aaKnown RBP9.5□□□□□ -0.89
COL4A6-203ENST00000394872 MKRN2Q9H000 416 aaKnown RBP9.5□□□□□ -0.89
COL4A6-203ENST00000394872 PTTG3PQ9NZH4 202 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 FBXO4Q9UKT5 387 aa9.5□□□□□ -0.89
COL4A6-203ENST00000394872 PKD1L3Q7Z443 1732 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 GFYI3L273 518 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 AQP7O14520 342 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 FAM157BP0CG42 384 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 IHHQ14623 411 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 GCNT2Q8N0V5 402 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 TEX37Q96LM6 180 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 PSD2Q9BQI7 771 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 RANGRFQ9HD47 186 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 ASIC5Q9NY37 505 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 ZNF346Q9UL40 294 aaKnown RBP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 N4BP2Q86UW6 1770 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 TCRBV5S1A1TA0A578 114 aa9.49□□□□□ -0.89
COL4A6-203ENST00000394872 LCMT2O60294 686 aaKnown RBP9.49□□□□□ -0.89
COL4A6-203ENST00000394872 UBL3O95164 117 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms