RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 KCNE5Q9UJ90 142 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 PTPRZ1P23471 2315 aaPredicted RBP12□□□□□ -0.49
NFKB1-202ENST00000394820 TMEM269A0A1B0GVZ9 245 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 C7orf66A4D0T2 115 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 DCTN6O00399 190 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 TNFP01375 233 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 OR4E1P0C645 316 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 THEGLP0DJG4 465 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 HSD11B1P28845 292 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 FXYD4P59646 89 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 DUSP8Q13202 625 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 DMKNQ6E0U4 476 aaPredicted RBP12□□□□□ -0.49
NFKB1-202ENST00000394820 OR1S2Q8NGQ3 325 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 ZNF417Q8TAU3 575 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 CMSS1Q9BQ75 279 aaKnown RBP12□□□□□ -0.49
NFKB1-202ENST00000394820 CYB5R1Q9UHQ9 305 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 GPN3Q9UHW5 284 aaPredicted RBP12□□□□□ -0.49
NFKB1-202ENST00000394820 ROS1P08922 2347 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 A0A087WV62 115 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 ALOX12BO75342 701 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 RAB40ALP0C0E4 278 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 RNH1P13489 461 aaKnown RBP12□□□□□ -0.49
NFKB1-202ENST00000394820 IL9P15248 144 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 ATP1B3P54709 279 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 H2BFSP57053 126 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 KLF9Q13886 244 aaPredicted RBP12□□□□□ -0.49
NFKB1-202ENST00000394820 PWWP2BQ6NUJ5 590 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 CD300LDQ6UXZ3 194 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 RNF113BQ8IZP6 322 aaKnown RBP12□□□□□ -0.49
NFKB1-202ENST00000394820 RAB40AQ8WXH6 277 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 FGGYQ96C11 551 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 TOE1Q96GM8 510 aaKnown RBP12□□□□□ -0.49
NFKB1-202ENST00000394820 FANCFQ9NPI8 374 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 SLC22A11Q9NSA0 550 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 CES1P1Q9UKY3 287 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 PLXNA2O75051 1894 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 ZDBF2Q9HCK1 2354 aa12□□□□□ -0.49
NFKB1-202ENST00000394820 IGHV3-20A0A0C4DH32 117 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 A0A1B0GUH1 482 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 NPIPA5E9PKD4 350 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 HLA-DQB1P01920 261 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 GLULP15104 373 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 ST6GAL1P15907 406 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 OR2B8PP59922 312 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 ACTBP60709 375 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 ACTG1P63261 375 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 ZNF425Q6IV72 752 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 CD200R1LQ6Q8B3 271 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 C16orf47Q6ZP98 133 aaPredicted RBP11.99□□□□□ -0.49
NFKB1-202ENST00000394820 ZNF681Q96N22 645 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 FAM60AQ9NP50 221 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 INPP5EQ9NRR6 644 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 NPIPA1Q9UND3 350 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 FOXJ3Q9UPW0 622 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 DTX4Q9Y2E6 619 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 B3GALT1Q9Y5Z6 326 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 TRANK1O15050 2925 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 C2orf74A8MZ97 194 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 TMEM150CB9EJG8 249 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 SHOXO15266 292 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 FREM3P0C091 2139 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 GP1BBP13224 206 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 PDZK1IP1Q13113 114 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 ADAM5Q6NVV9 412 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 DGAT2L6Q6ZPD8 337 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 DND1Q8IYX4 353 aaKnown RBP11.99□□□□□ -0.49
NFKB1-202ENST00000394820 GABRG1Q8N1C3 465 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 RNASE11Q8TAA1 199 aaKnown RBP11.99□□□□□ -0.49
NFKB1-202ENST00000394820 STK35Q8TDR2 534 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 ELP5Q8TE02 316 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 OR2A5Q96R48 311 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 PRSS27Q9BQR3 290 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 PITHD1Q9GZP4 211 aaPredicted RBP11.99□□□□□ -0.49
NFKB1-202ENST00000394820 PCDHB10Q9UN67 800 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 C19orf53Q9UNZ5 99 aaPredicted RBP11.99□□□□□ -0.49
NFKB1-202ENST00000394820 B9D1Q9UPM9 204 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 ZNF337Q9Y3M9 751 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 POLEQ07864 2286 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 MPDZO75970 2070 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 PIN1P1O15428 100 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 AHSA1O95433 338 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 CLINT1Q14677 625 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 PDZD11Q5EBL8 140 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 FCRL6Q6DN72 434 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 KCTD18Q6PI47 426 aaPredicted RBP11.99□□□□□ -0.49
NFKB1-202ENST00000394820 TMEM184AQ6ZMB5 413 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 ZNF704Q6ZNC4 412 aaPredicted RBP11.99□□□□□ -0.49
NFKB1-202ENST00000394820 SLC16A13Q7RTY0 426 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 NUP54Q7Z3B4 507 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 NEK7Q8TDX7 302 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 ELSPBP1Q96BH3 223 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 KLHDC2Q9Y2U9 406 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 WDFY3Q8IZQ1 3526 aa11.99□□□□□ -0.49
NFKB1-202ENST00000394820 GPRIN2O60269 458 aa11.98□□□□□ -0.49
NFKB1-202ENST00000394820 UBBP0CG47 229 aa11.98□□□□□ -0.49
NFKB1-202ENST00000394820 UBCP0CG48 685 aaKnown RBP11.98□□□□□ -0.49
NFKB1-202ENST00000394820 PTBP1P26599 531 aaKnown RBP eCLIP11.98□□□□□ -0.499e-7■■■■□ 24.6
NFKB1-202ENST00000394820 HTR2CP28335 458 aa11.98□□□□□ -0.49
NFKB1-202ENST00000394820 CD80P33681 288 aa11.98□□□□□ -0.49
NFKB1-202ENST00000394820 THBS2P35442 1172 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms