RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 OR52D1Q9H346 318 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 MARCH4Q9P2E8 410 aaPredicted RBP12.41□□□□□ -0.42
USP49-203ENST00000394253 NCKAP5O14513 1909 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 ST8SIA5O15466 376 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 GPR32O75388 356 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 SLC35E2BP0CK96 405 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 CCR9P51686 369 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 TAS2R60P59551 318 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 GNB1P62873 340 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 SSBP1Q04837 148 aaKnown RBP12.41□□□□□ -0.42
USP49-203ENST00000394253 DOC2AQ14183 400 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 GLYATL3Q5SZD4 288 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 CLEC4CQ8WTT0 213 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 SUSD3Q96L08 255 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 MMP26Q9NRE1 261 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 PIGLQ9Y2B2 252 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 PCNX1Q96RV3 2341 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 M0QZ24 198 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 MAN2B1O00754 1011 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 FOLR3P41439 243 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 GNG4P50150 75 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 SLC5A12Q1EHB4 618 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 SLC16A14Q7RTX9 510 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 SLC35B4Q969S0 331 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 ARRDC3Q96B67 414 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 EGLN1Q9GZT9 426 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 NAT8BQ9UHF3 227 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 ZNF443Q9Y2A4 671 aaPredicted RBP12.41□□□□□ -0.42
USP49-203ENST00000394253 ZCWPW2A0A1B0GU75 182 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 TRABD2BA6NFA1 517 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 SIAH2O43255 324 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 LRRC26Q2I0M4 334 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 C11orf54Q9H0W9 315 aaPredicted RBP12.41□□□□□ -0.42
USP49-203ENST00000394253 B3GALT5Q9Y2C3 310 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 SPATA31A1Q5TZJ5 1347 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 OR5G3P0C626 314 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 PCBP4P57723 403 aaKnown RBP12.41□□□□□ -0.42
USP49-203ENST00000394253 OR4C16Q8NGL9 310 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 BOD1Q96IK1 185 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 TMEM184BQ9Y519 407 aaPredicted RBP12.41□□□□□ -0.42
USP49-203ENST00000394253 CCR7P32248 378 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 FKBP1BP68106 108 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 LMX1BO60663 402 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 RTP3Q9BQQ7 232 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 RSG1Q9BU20 258 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 ULBP2Q9BZM5 246 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 FAM198AQ9UFP1 575 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 COX7A2P2O60397 106 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 CD37P11049 281 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 LYSMD2Q8IV50 215 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 PRSS3P2Q8NHM4 247 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 GPR78Q96P69 363 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 F2RL3Q96RI0 385 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 GDF2Q9UK05 429 aaPredicted RBP12.4□□□□□ -0.42
USP49-203ENST00000394253 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 NXPH3O95157 252 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 AIFM1O95831 613 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 MEOX2P50222 304 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 ASAH1Q13510 395 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 SHHQ15465 462 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 RPEL1Q2QD12 228 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 IRF2BP1Q8IU81 584 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 SLC26A10Q8NG04 563 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 OR6M1Q8NGM8 313 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 PELI2Q9HAT8 420 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 TRAV27A0A087WT01 109 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 ELOA3CA0A087WX78 387 aaPredicted RBP12.4□□□□□ -0.42
USP49-203ENST00000394253 KLF7O75840 302 aaPredicted RBP12.4□□□□□ -0.42
USP49-203ENST00000394253 SMAGPQ0VAQ4 97 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 MARCH8Q5T0T0 291 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 PTDSS2Q9BVG9 487 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 PTGDR2Q9Y5Y4 395 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 TRAV34A0A0B4J273 112 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 SFTA3P0C7M3 94 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 TRA2BP62995 288 aaKnown RBP12.4□□□□□ -0.42
USP49-203ENST00000394253 NAXDQ8IW45 347 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 TAAR9Q96RI9 348 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 NUDT16L1Q9BRJ7 211 aaKnown RBP12.4□□□□□ -0.42
USP49-203ENST00000394253 A3GALT2U3KPV4 340 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 PREX1Q8TCU6 1659 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 GABRR3A8MPY1 467 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 TFAP2AP05549 437 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 GYPBP06028 91 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 POU3F1Q03052 451 aaPredicted RBP12.4□□□□□ -0.42
USP49-203ENST00000394253 RGMBQ6NW40 437 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 CHST14Q8NCH0 376 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 NUP37Q8NFH4 326 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 TMIGD2Q96BF3 282 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 MIEN1Q9BRT3 115 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 HES4Q9HCC6 221 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 NDUFB11Q9NX14 153 aa12.4□□□□□ -0.42
USP49-203ENST00000394253 HOXD13P35453 343 aa12.4□□□□□ -0.43
USP49-203ENST00000394253 PKIAP61925 76 aa12.4□□□□□ -0.43
USP49-203ENST00000394253 SSX1Q16384 188 aa12.4□□□□□ -0.43
USP49-203ENST00000394253 TMEM184AQ6ZMB5 413 aa12.4□□□□□ -0.43
USP49-203ENST00000394253 MRIQ9BWK5 157 aa12.4□□□□□ -0.43
USP49-203ENST00000394253 C17orf105B2RV13 164 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 SEMA7AO75326 666 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 CHRM2P08172 466 aa12.39□□□□□ -0.43
USP49-203ENST00000394253 NQO2P16083 231 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms