RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 TMEM150CB9EJG8 249 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 IGF2P01344 180 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 LIPCP11150 499 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 GABRA1P14867 456 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 NUP62P37198 522 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 GABRA4P48169 554 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 EIF2B1Q14232 305 aaKnown RBP12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 GLYATL3Q5SZD4 288 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 GSG1LQ6UXU4 331 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 ZNF679Q8IYX0 411 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 GABRG1Q8N1C3 465 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 OR51A2Q8NGJ7 313 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 NUDT9Q9BW91 350 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 TINAGL1Q9GZM7 467 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 LAT2Q9GZY6 243 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 FBXL2Q9UKC9 423 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 THADAQ6YHU6 1953 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 TRAV36DV7A0A075B6V5 113 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 PRSS37A4D1T9 235 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 PPP3CBP16298 524 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 TMEM225Q6GV28 225 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 SLC18B1Q6NT16 456 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 CLEC1AQ8NC01 280 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 LMX1AQ8TE12 382 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 SLC46A1Q96NT5 459 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 MNTQ99583 582 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 WBP1LQ9NX94 342 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 MED11Q9P086 117 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 MMP17Q9ULZ9 603 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 TUBAL3A6NHL2 446 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 OR6C65A6NJZ3 312 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 PHYHO14832 338 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 PTGS2P35354 604 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 SPOCK1Q08629 439 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 CCINQ13939 588 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 GK2Q14410 553 aaPredicted RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 C17orf107Q6ZR85 190 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 MAMDC2Q7Z304 686 aaPredicted RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 GALNT16Q8N428 558 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 OR6M1Q8NGM8 313 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 SCARB1Q8WTV0 552 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 NKD1Q969G9 470 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 MRPL38Q96DV4 380 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 CMKLR1Q99788 373 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 TBL1XR1Q9BZK7 514 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 ZNF230Q9UIE0 474 aaPredicted RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 FARSAQ9Y285 508 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 ALOX12BO75342 701 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 RAB3DO95716 219 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 HOXD4P09016 255 aaPredicted RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 RPL27P61353 136 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 TMEM81Q6P7N7 255 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 JAGN1Q8N5M9 183 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 RELL2Q8NC24 303 aaPredicted RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 ZBTB44Q8NCP5 570 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 RNF128Q8TEB7 428 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 PELOQ9BRX2 385 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 ABHD6Q9BV23 337 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 MFFQ9GZY8 342 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 PDE7BQ9NP56 450 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 PFDN2Q9UHV9 154 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 FBXO4Q9UKT5 387 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 SESN1Q9Y6P5 492 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 FRG2CA6NGY1 282 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 HMSDA8MTL9 139 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 NUPL2O15504 423 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 B3GALNT1O75752 331 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 AMY2AP04746 511 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 GP1BBP13224 206 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 ZP3P21754 424 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 BLKP51451 505 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 SCGB2B2Q4G0G5 96 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 HLA-DQA1Q5Y7H0 255 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 GPX8Q8TED1 209 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 ASB5Q8WWX0 329 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 ADIPOR1Q96A54 375 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 SEH1LQ96EE3 360 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 SLC25A44Q96H78 314 aaPredicted RBP12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 PTDSS2Q9BVG9 487 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 PPA2Q9H2U2 334 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 LRP12Q9Y561 859 aa12.55□□□□□ -0.4
GAPVD1-205ENST00000394084 TMEM131Q92545 1883 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 LOC100509620A0A075B734 347 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 LMX1BO60663 402 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 ZNF28P17035 718 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 HTR2CP28335 458 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 SLC6A8P48029 635 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 EFNA3P52797 238 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 SCAND1P57086 179 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 FOXL2P58012 376 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 PLCXD2Q0VAA5 305 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 MOGAT2Q3SYC2 334 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 VWA2Q5GFL6 755 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 ZNF721Q8TF20 911 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 TPSD1Q9BZJ3 242 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 COA3Q9Y2R0 106 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 EMC9Q9Y3B6 208 aa12.54□□□□□ -0.4
GAPVD1-205ENST00000394084 MRPS18BQ9Y676 258 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms