RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 RIMS3Q9UJD0 308 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 KLHL21Q9UJP4 597 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 ZDHHC8Q9ULC8 765 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 HIF3AQ9Y2N7 669 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 SH3GLB1Q9Y371 365 aa14.86□□□□□ -0.03
SNRPA1-202ENST00000394082 LOC105371242A0A075B767 164 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 PLSCR5A0PG75 271 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 TPD52L2O43399 206 aaKnown RBP14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 UBOX5O94941 541 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 IFNA14P01570 189 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 IGHV1-46P01743 117 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 CD55P08174 381 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 ZNF32P17041 273 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 TUBG1P23258 451 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 WNT5AP41221 380 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 TAS2R41P59536 307 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 ZMAT1Q5H9K5 638 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 COQ5Q5HYK3 327 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 THEM4Q5T1C6 240 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 AVPI1Q5T686 147 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 DCAF12L2Q5VW00 463 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 ERICH5Q6P6B1 374 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 ALDH16A1Q8IZ83 802 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 ZNF101Q8IZC7 436 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 PFN4Q8NHR9 129 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 KLF14Q8TD94 323 aaPredicted RBP14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 TMEM255BQ8WV15 326 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 HDAC2Q92769 488 aaKnown RBP14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 GCDHQ92947 438 aaPredicted RBP14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 EGLN1Q9GZT9 426 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 TUBG2Q9NRH3 451 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 C20orf141Q9NUB4 165 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 MED31Q9Y3C7 131 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 DYSFO75923 2080 aa14.85□□□□□ -0.03
SNRPA1-202ENST00000394082 LOC100509620A0A075B734 347 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 SLC2A10O95528 541 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 IGHMP01871 453 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 CST2P09228 141 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 GDI2P50395 445 aaKnown RBP14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 PCBD1P61457 104 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 PSG4Q00888 419 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 ANKDD1AQ495B1 522 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 TTMPQ5BVD1 217 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 FAM205BPQ63HN1 556 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 SLC25A47Q6Q0C1 308 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 FOXL2NBQ6ZUU3 175 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 SYT9Q86SS6 491 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 TREML1Q86YW5 311 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 C3orf56Q8N813 242 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 ICA1LQ8NDH6 482 aa14.84□□□□□ -0.03
SNRPA1-202ENST00000394082 C5orf49A4QMS7 147 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 HMGB1P1B2RPK0 211 aaPredicted RBP14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 FBP2O00757 339 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 SPRY1O43609 319 aaPredicted RBP14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 FSHBP01225 129 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 CCNOP22674 350 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 CDAP32320 146 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 CD47Q08722 323 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 PIN1Q13526 163 aaPredicted RBP14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 TSTQ16762 297 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 TUSC1Q2TAM9 212 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 ALG10Q5BKT4 473 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 THSD4Q6ZMP0 1018 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 ZER1Q7Z7L7 766 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 MOSPD2Q8NHP6 518 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 SLC25A40Q8TBP6 338 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 IPCEF1Q8WWN9 437 aaPredicted RBP14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 CCL17Q92583 94 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 GTF3AQ92664 365 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 LRRC58Q96CX6 371 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 RBP7Q96R05 134 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 GAL3ST1Q99999 423 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 ECSITQ9BQ95 431 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 OR2H1Q9GZK4 316 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 ELOVL3Q9HB03 270 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 NTN4Q9HB63 628 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 TIMM10BQ9Y5J6 103 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 CACNG2Q9Y698 323 aa14.83□□□□□ -0.04
SNRPA1-202ENST00000394082 IGKV1D-43A0A0B4J1Z2 117 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 FXYD1O00168 92 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 EDF1O60869 148 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 ADRA2CP18825 462 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 MAKP20794 623 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 MPV17P39210 176 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 GUCA1AP43080 201 aaPredicted RBP14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 RPL27P61353 136 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 ST3GAL3Q11203 375 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 LAPTM4AQ15012 233 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 SGCAQ16586 387 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 TMEM255AQ5JRV8 349 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 ARL9Q6T311 187 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 HDXQ7Z353 690 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 OR2J1Q9GZK6 312 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 C7orf69Q9H7B7 122 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 OPN4Q9UHM6 478 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 POLR3KQ9Y2Y1 108 aaPredicted RBP14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 WNK2Q9Y3S1 2297 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 TANC2Q9HCD6 1990 aa14.82□□□□□ -0.04
SNRPA1-202ENST00000394082 ZSCAN5BA6NJL1 495 aa14.81□□□□□ -0.04
SNRPA1-202ENST00000394082 SPRY3O43610 288 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms