RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 IGKV1D-43A0A0B4J1Z2 117 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 C5orf49A4QMS7 147 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 TRAPPC13A5PLN9 417 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 F5H0A9 414 aaPredicted RBP12.96□□□□□ -0.33
CHMP3-202ENST00000393773 H3BSA7 217 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 CLDN34H7C241 214 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 TRMUO75648 421 aaKnown RBP12.96□□□□□ -0.33
CHMP3-202ENST00000393773 UMPSP11172 480 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 CCNOP22674 350 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 GCH1P30793 250 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 CDAP32320 146 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 UGT2B15P54855 530 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 IL13RA1P78552 427 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 FMODQ06828 376 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 TREML1Q86YW5 311 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 SYT14Q8NB59 555 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 AKR7LQ8NHP1 331 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 TAF15Q92804 592 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHMP3-202ENST00000393773 PRSS27Q9BQR3 290 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 EGLN1Q9GZT9 426 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 PCDHAC1Q9H158 963 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 SIAEQ9HAT2 523 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 CCNB1IP1Q9NPC3 277 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 CYSLTR2Q9NS75 346 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 CCDC167Q9P0B6 97 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 ZDHHC8Q9ULC8 765 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 INSIG2Q9Y5U4 225 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 AUP1Q9Y679 476 aa12.96□□□□□ -0.33
CHMP3-202ENST00000393773 A0A1W2PRG6 482 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 MCIDASD6RGH6 385 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 ERLIN1O75477 346 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 F13BP05160 661 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 ACADSP16219 412 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 CD247P20963 164 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 SLC18A1P54219 525 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 BAMBIQ13145 260 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 MIDNQ504T8 468 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 ARMC4Q5T2S8 1044 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 DLEU7Q6UYE1 221 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 HDDC2Q7Z4H3 204 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 C11orf65Q8NCR3 313 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 VANGL1Q8TAA9 524 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-202ENST00000393773 ABHD4Q8TB40 342 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 MPP4Q96JB8 637 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 DIRC2Q96SL1 478 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 GPA33Q99795 319 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 EBF4Q9BQW3 602 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 SMURF2Q9HAU4 748 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 PATZ1Q9HBE1 687 aaKnown RBP12.95□□□□□ -0.34
CHMP3-202ENST00000393773 MSL2Q9HCI7 577 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-202ENST00000393773 KLHL21Q9UJP4 597 aa12.95□□□□□ -0.34
CHMP3-202ENST00000393773 BLOC1S5-TXNDC5H3BN57 136 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 POLR3GO15318 223 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-202ENST00000393773 HIST1H2ABP04908 130 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 TSPAN19P0C672 248 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 LIPAP38571 399 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 SLC6A9P48067 706 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 DAP3P51398 398 aaKnown RBP12.94□□□□□ -0.34
CHMP3-202ENST00000393773 CRYBA2P53672 197 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 PPP1CBP62140 327 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 ERVK-25P63136 954 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 PSG4Q00888 419 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 SELPLGQ14242 412 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 SLC9A3R2Q15599 337 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 TMEM155Q4W5P6 130 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 ZMAT1Q5H9K5 638 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 HIST3H2AQ7L7L0 130 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 SPICQ8N5J4 248 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 ZNF283Q8N7M2 679 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 PFN4Q8NHR9 129 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 HDAC2Q92769 488 aaKnown RBP12.94□□□□□ -0.34
CHMP3-202ENST00000393773 HIST1H2ACQ93077 130 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 SLC25A28Q96A46 364 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 SIGLEC11Q96RL6 698 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 SLITRK2Q9H156 845 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 WNT5BQ9H1J7 359 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 TMEM106BQ9NUM4 274 aa12.94□□□□□ -0.34
CHMP3-202ENST00000393773 A0A0G2JK05 382 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 NPIPB13A6NJU9 1138 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 POM121CA8CG34 1229 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 EVPLLA8MZ36 301 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 NPIPB4C9JG80 1138 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 NGFP01138 241 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 IGHV4-38-2P0DP08 117 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 MDKP21741 143 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-202ENST00000393773 GDI2P50395 445 aaKnown RBP12.93□□□□□ -0.34
CHMP3-202ENST00000393773 BTG1P62324 171 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 TNFAIP6P98066 277 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-202ENST00000393773 ZMYND11Q15326 602 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 CYP51A1Q16850 503 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 RUNDC3AQ59EK9 446 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 LEG1Q6P5S2 330 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 UNQ6126/PRO20091Q6UXV3 157 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 C9orf139Q6ZV77 190 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 CROCCP2Q86T23 111 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 C1orf174Q8IYL3 243 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 TAMM41Q96BW9 452 aa12.93□□□□□ -0.34
CHMP3-202ENST00000393773 DCLRE1CQ96SD1 692 aaKnown RBP12.93□□□□□ -0.34
CHMP3-202ENST00000393773 MRI1Q9BV20 369 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms