RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CATR1Q13166 79 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 GGNBP1Q5YKI7 109 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 CCDC190Q86UF4 302 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 KIAA1958Q8N8K9 716 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 OR6K3Q8NGY3 331 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 RAB9BQ9NP90 201 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 NTNG1Q9Y2I2 539 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 ZNF320A2RRD8 509 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 SNRPGP15A8MWD9 76 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 GLCEO94923 617 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 PRPH2P23942 346 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 PCBP4P57723 403 aaKnown RBP14.86□□□□□ -0.03
SHANK1-204ENST00000391814 CDONQ4KMG0 1287 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 ZNF787Q6DD87 383 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 NKAIN3Q8N8D7 197 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 ZNF845Q96IR2 970 aaPredicted RBP14.86□□□□□ -0.03
SHANK1-204ENST00000391814 SLC17A9Q9BYT1 436 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 UBQLN3Q9H347 655 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 C8orf33Q9H7E9 229 aaPredicted RBP14.86□□□□□ -0.03
SHANK1-204ENST00000391814 B3GALT5Q9Y2C3 310 aa14.86□□□□□ -0.03
SHANK1-204ENST00000391814 SERTM2A0A1B0GWG4 89 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 ZAR1LA6NP61 321 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 YKT6O15498 198 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 ENSAO43768 121 aaKnown RBP14.85□□□□□ -0.03
SHANK1-204ENST00000391814 TOX4O94842 621 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 FGF7P21781 194 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 NKX2-1P43699 371 aaPredicted RBP14.85□□□□□ -0.03
SHANK1-204ENST00000391814 MED18Q9BUE0 208 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 NKX2-4Q9H2Z4 354 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 DCTDP32321 178 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 FAM209AQ5JX71 171 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 VRK3Q8IV63 474 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 CXorf58Q96LI9 332 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 ZNF2Q9BSG1 426 aaPredicted RBP14.85□□□□□ -0.03
SHANK1-204ENST00000391814 BCO1Q9HAY6 547 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 PCDHB10Q9UN67 800 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 H0YIV9 168 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 GCH1P30793 250 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 NR0B2Q15466 257 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 SLC35D3Q5M8T2 416 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 B3GNT9Q6UX72 402 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 UBQLN4Q9NRR5 601 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 CA14Q9ULX7 337 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 CLEC3BP05452 202 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 F2RL1P55085 397 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 CLDN17P56750 224 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 ANKLE1Q8NAG6 615 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 MMP26Q9NRE1 261 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 SPATA6Q9NWH7 488 aaPredicted RBP14.85□□□□□ -0.03
SHANK1-204ENST00000391814 PADI1Q9ULC6 663 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 PTTG1IPP53801 180 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 RUNX2Q13950 521 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 LPAL2Q16609 132 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 GLIPR2Q9H4G4 154 aa14.85□□□□□ -0.03
SHANK1-204ENST00000391814 SLC25A35Q3KQZ1 300 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 OR2A2Q6IF42 318 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 TOMM20LQ6UXN7 152 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 NKAIN4Q8IVV8 208 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 MFSD9Q8NBP5 474 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 SHDQ96IW2 340 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 WSB2Q9NYS7 404 aaPredicted RBP14.84□□□□□ -0.03
SHANK1-204ENST00000391814 PISDQ9UG56 409 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 LAMP3Q9UQV4 416 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 PIGLQ9Y2B2 252 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 J3QR89 54 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 CNMDO75829 334 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 DDAH2O95865 285 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 CD3DP04234 171 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 NCR3LG1Q68D85 454 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 BAP18Q8IXM2 172 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 PRSS35Q8N3Z0 413 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 TEAD3Q99594 435 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 OBP2BQ9NPH6 170 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 KCNIP2Q9NS61 270 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 ZNF195O14628 629 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 USF1P22415 310 aaPredicted RBP14.84□□□□□ -0.03
SHANK1-204ENST00000391814 DCXRQ7Z4W1 244 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 LYG2Q86SG7 212 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 PPP1R1CQ8WVI7 109 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 NXF2Q9GZY0 626 aaKnown RBP14.84□□□□□ -0.03
SHANK1-204ENST00000391814 UCK1Q9HA47 277 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 TCAPO15273 167 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 NAT2P11245 290 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 ZNF133P52736 654 aaPredicted RBP14.84□□□□□ -0.03
SHANK1-204ENST00000391814 MAT1AQ00266 395 aaKnown RBP14.84□□□□□ -0.03
SHANK1-204ENST00000391814 BAMBIQ13145 260 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 XKR7Q5GH72 579 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 ADAM29Q9UKF5 820 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 NPFFR2Q9Y5X5 522 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 A0A087WUU8 490 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 TEAD1P28347 426 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 TMEM81Q6P7N7 255 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 OR1J2Q8NGS2 313 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 AMDHD1Q96NU7 426 aa14.84□□□□□ -0.03
SHANK1-204ENST00000391814 TINAGL1Q9GZM7 467 aaPredicted RBP14.84□□□□□ -0.03
SHANK1-204ENST00000391814 TRBV11-1A0A0K0K1C0 115 aa14.83□□□□□ -0.03
SHANK1-204ENST00000391814 A0A1B0GWA3 101 aa14.83□□□□□ -0.03
SHANK1-204ENST00000391814 PHYHIPQ92561 330 aa14.83□□□□□ -0.03
SHANK1-204ENST00000391814 A0A1W2PPQ1 181 aa14.83□□□□□ -0.04
SHANK1-204ENST00000391814 CD37P11049 281 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms