RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 ZNF75AQ96N20 296 aa13.06□□□□□ -0.32
IGHV3-53-201ENST00000390627 WACQ9BTA9 647 aa13.06□□□□□ -0.32
IGHV3-53-201ENST00000390627 RACGAP1Q9H0H5 632 aa13.06□□□□□ -0.32
IGHV3-53-201ENST00000390627 RPRD1BQ9NQG5 326 aaKnown RBP13.06□□□□□ -0.32
IGHV3-53-201ENST00000390627 REV1Q9UBZ9 1251 aa13.06□□□□□ -0.32
IGHV3-53-201ENST00000390627 KLHL21Q9UJP4 597 aa13.06□□□□□ -0.32
IGHV3-53-201ENST00000390627 FKBP7Q9Y680 259 aa13.06□□□□□ -0.32
IGHV3-53-201ENST00000390627 CSMD2Q7Z408 3487 aa13.06□□□□□ -0.32
IGHV3-53-201ENST00000390627 ROS1P08922 2347 aa13.06□□□□□ -0.32
IGHV3-53-201ENST00000390627 IGHV2OR16-5A0A0B4J2B6 119 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 IQCMA0A1B0GVH7 501 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 E7EQL1 145 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 IGFBP1P08833 259 aaPredicted RBP13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 MMP7P09237 267 aaPredicted RBP13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 CALCRP30988 508 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 RAB39AQ14964 217 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 ZNF544Q6NX49 715 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 SLC27A4Q6P1M0 643 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 FAHD1Q6P587 224 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 B3GLCTQ6Y288 498 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 SYT9Q86SS6 491 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 NPEPL1Q8NDH3 523 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 SMAP2Q8WU79 429 aaPredicted RBP13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 TMEM171Q8WVE6 324 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 MS4A3Q96HJ5 214 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 DHRS9Q9BPW9 319 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 HEATR1Q9H583 2144 aaKnown RBP13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 PAPOLBQ9NRJ5 636 aaKnown RBP13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 BEX4Q9NWD9 120 aaPredicted RBP13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 B9D1Q9UPM9 204 aa13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 COA3Q9Y2R0 106 aaPredicted RBP13.05□□□□□ -0.32
IGHV3-53-201ENST00000390627 CSMD1Q96PZ7 3565 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 IGLV1-36A0A0B4J1U3 117 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 OR6C68A6NDL8 312 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 RIIAD1A6NNX1 92 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 ZNF3P17036 446 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 ZNF32P17041 273 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 POU1F1P28069 291 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 GRK5P34947 590 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 CENPAP49450 140 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 FABP6P51161 128 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 LSM6P62312 80 aaKnown RBP13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 GLO1Q04760 184 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 ENDOGQ14249 297 aaKnown RBP13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 ZBTB46Q86UZ6 589 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 OR6V1Q8N148 313 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 FBXL14Q8N1E6 418 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 PARP8Q8N3A8 854 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 SLC37A3Q8NCC5 494 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 SLC30A7Q8NEW0 376 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 NUP37Q8NFH4 326 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 OR1J2Q8NGS2 313 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 OR2T4Q8NH00 348 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 FBXO17Q96EF6 278 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 TSSK2Q96PF2 358 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 ZNF416Q9BWM5 594 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 TEX12Q9BXU0 123 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 GABARAPL1Q9H0R8 117 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 CXorf56Q9H5V9 222 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 SRA1Q9HD15 236 aaKnown RBP13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 CMC2Q9NRP2 79 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 ITGB1BP2Q9UKP3 347 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 LAMP3Q9UQV4 416 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 POLR1DQ9Y2S0 133 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 TIMM10BQ9Y5J6 103 aa13.04□□□□□ -0.32
IGHV3-53-201ENST00000390627 DSCAMO60469 2012 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 NAV2Q8IVL1 2488 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 POLQO75417 2590 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 ANKRD17O75179 2603 aaKnown RBP13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 DCTN6O00399 190 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 DANCRP0C864 163 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 APOBEC3AP31941 199 aaPredicted RBP13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 APLNRP35414 380 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 GALK2Q01415 458 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 SCRN3Q0VDG4 424 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 AQP6Q13520 282 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 ZSCAN26Q16670 478 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 TBC1D28Q2M2D7 210 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 PABPC1L2AQ5JQF8 200 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 AGAP6Q5VW22 663 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 DTX2Q86UW9 622 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 ZNF584Q8IVC4 421 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 ALDH16A1Q8IZ83 802 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 IQCF1Q8N6M8 205 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 CYB561A3Q8NBI2 242 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 C11orf40Q8WZ69 217 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 FOXN4Q96NZ1 517 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 FOXC2Q99958 501 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 SEMA6AQ9H2E6 1030 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 FN3KQ9H479 309 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 CDH20Q9HBT6 801 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 EMC7Q9NPA0 242 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 CA10Q9NS85 328 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 KRT84Q9NSB2 600 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 ENOPH1Q9UHY7 261 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 SPEF1Q9Y4P9 236 aa13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 HRNRQ86YZ3 2850 aaPredicted RBP13.03□□□□□ -0.32
IGHV3-53-201ENST00000390627 VSTM5A8MXK1 200 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 H3BNX3 289 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms