RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SAMD12Q8N8I0 201 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 OR10H5Q8NGA6 315 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 KCNE4Q8WWG9 221 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 HTRA1Q92743 480 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 B3GAT2Q9NPZ5 323 aa22.47■■□□□ 1.19
SHOX2-201ENST00000389589 MRPS18CQ9Y3D5 142 aaKnown RBP22.47■■□□□ 1.19
SHOX2-201ENST00000389589 A0A0G2JMM0 328 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 A0A1B0GTH9 108 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 A0A1W2PPB8 328 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 A0A1W2PRS3 328 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 ZNF726A6NNF4 738 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 KIR3DP1A8MWS1 328 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 GPR171O14626 319 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 TLX3O43711 291 aaPredicted RBP22.46■■□□□ 1.19
SHOX2-201ENST00000389589 SLC2A2P11168 524 aaPredicted RBP22.46■■□□□ 1.19
SHOX2-201ENST00000389589 NPR2P20594 1047 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 LAP3P28838 519 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 KIR3DL2P43630 455 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 CD97P48960 835 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 WDR38Q5JTN6 314 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 ABI3Q9P2A4 366 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 EXTL2Q9UBQ6 330 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 AK6Q9Y3D8 172 aaKnown RBP22.46■■□□□ 1.19
SHOX2-201ENST00000389589 LRP12Q9Y561 859 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 NCKAP5O14513 1909 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 A0A1W2PQ09 198 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 PRR33A8MZF0 331 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 NR2C1P13056 603 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 ATF1P18846 271 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 CNR1P21554 472 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 CASRP41180 1078 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 DCAF10Q5QP82 559 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 ABHD17BQ5VST6 288 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 GDPD3Q7L5L3 318 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 DCXRQ7Z4W1 244 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 ZNF554Q86TJ5 538 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 RHBDL2Q9NX52 303 aa22.46■■□□□ 1.19
SHOX2-201ENST00000389589 TRABD2BA6NFA1 517 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 DNPH1O43598 174 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 B3GALT5-AS1P59052 145 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 STPG1Q5TH74 334 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 SYT9Q86SS6 491 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 ST7LQ8TDW4 575 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 TCF7L1Q9HCS4 588 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 ETAA1Q9NY74 926 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 OTOGLQ3ZCN5 2332 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 A0A087WV48 116 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 RAMP1O60894 148 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 RBMS1P29558 406 aaKnown RBP22.45■■□□□ 1.18
SHOX2-201ENST00000389589 POU4F3Q15319 338 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 HIST3H3Q16695 136 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 OR7E24Q6IFN5 339 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 SPATC1Q76KD6 591 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 Q8N402 240 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 OR14L1PQ8NHC6 308 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 C11orf40Q8WZ69 217 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 SMAD5Q99717 465 aaKnown RBP22.45■■□□□ 1.18
SHOX2-201ENST00000389589 LRFN1Q9P244 771 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 MALT1Q9UDY8 824 aa22.45■■□□□ 1.18
SHOX2-201ENST00000389589 TRBV5-7A0A0A0MS05 114 aa22.44■■□□□ 1.18
SHOX2-201ENST00000389589 LRRC3CA6NJW4 275 aa22.44■■□□□ 1.18
SHOX2-201ENST00000389589 AIMP2Q13155 320 aaKnown RBP22.44■■□□□ 1.18
SHOX2-201ENST00000389589 ASAH1Q13510 395 aa22.44■■□□□ 1.18
SHOX2-201ENST00000389589 SLC25A47Q6Q0C1 308 aa22.44■■□□□ 1.18
SHOX2-201ENST00000389589 SNRNP27Q8WVK2 155 aaKnown RBP22.44■■□□□ 1.18
SHOX2-201ENST00000389589 EIF4EP06730 217 aaKnown RBP22.43■■□□□ 1.18
SHOX2-201ENST00000389589 CD82P27701 267 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 P2RY14Q15391 338 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 CATSPERDQ86XM0 798 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 DEFB124Q8NES8 71 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 NKD1Q969G9 470 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 CMTM3Q96MX0 182 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 SLC25A18Q9H1K4 315 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 BOKQ9UMX3 212 aaPredicted RBP22.43■■□□□ 1.18
SHOX2-201ENST00000389589 R4GMQ9 66 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 PAHP00439 452 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 HLA-DQB1P01920 261 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 MAGEB1P43366 347 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 AGFG1P52594 562 aaKnown RBP22.43■■□□□ 1.18
SHOX2-201ENST00000389589 CCBE1Q6UXH8 406 aaPredicted RBP22.43■■□□□ 1.18
SHOX2-201ENST00000389589 LINC00346Q8IVM7 164 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 IL22RA1Q8N6P7 574 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 MRI1Q9BV20 369 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 ZFP64Q9NPA5 681 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 BRD7Q9NPI1 651 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 DEPPQ9NTK1 212 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 IL17BQ9UHF5 180 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 SPATA2Q9UM82 520 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 V9GY05 133 aa22.43■■□□□ 1.18
SHOX2-201ENST00000389589 A0A0J9YW62 118 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 A0A1W2PPL8 197 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 AIPO00170 330 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 PNPP00491 289 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 KLK2P20151 261 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 CD96P40200 585 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 SOX2P48431 317 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 CLDN17P56750 224 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 TRIQKQ629K1 86 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 STAC2Q6ZMT1 411 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 YRDCQ86U90 279 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms